@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0367: (2015-11-30 )
MSTPITVAYGDGIGPEIMEAVLSMLREAEAKISIDVIEIGERVYNKEWSYGISPSGWESIERTKVLLKSPTTTSQGKGHKSLNVALRKSLGLYANIRPCTSYHPVIENKFDRFDIVVIRENEEDVYTGIEHRLTGNSYQCTKIITRSGSEKICRYAFNYAKRHNRKKVTCLTKDNIMKMTDGIFHTAFDSIAKEYPDIKAEHYIVDIGMARVATEPENFDVIVTENLYGDILSDIVAQTSGSVGLAGSSNIGSEYAMFEAVHGSAPNIAGKNIANPSGLLNAAVHMLIYIGQADVAKLVHDAWLKTLEDGIHTADLYKEKKSKQKVGTKEFAEAVIDNIGKKPGILPELIISNGVSSKISKIQGNCEQDYKVRKLVGSDITLAWDKSSNFNQIVKLFESSNPKVIAIYSKGLAIWPGDSKSLSDQVTCRFIANNEKKTITNIDVNNLLIKLERNSFDVVRMDKLYLYDEKEGFFS

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ICT_A_4(1CW7)
IDH_ECOLI
[Raw transfer]




ICT_E_5(1PB1)
IDH_ECOLI
[Raw transfer]




CIT_F_6(2D1C)
IDH_THET8
[Raw transfer]




ICA_A_3(1AI2)
IDH_ECOLI
[Raw transfer]




CIT_A_3(1HQS)
IDH_BACSU
[Raw transfer]




ICT_A_3(5ICD)
IDH_ECOLI
[Raw transfer]




ICT_A_4(1P8F)
IDH_ECOLI
[Raw transfer]




IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]




AKG_A_3(1BL5)
IDH_ECOLI
[Raw transfer]




CIT_A_3(1HQS)
IDH_BACSU
[Raw transfer]




GGG_A_3(3TY3)
LYS12_SCHPO
[Raw transfer]




GOL_B_12(3TY4)
LYS12_SCHPO
[Raw transfer]




CIT_B_4(1HQS)
IDH_BACSU
[Raw transfer]




GOL_A_5(3TY4)
LYS12_SCHPO
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




IPM_A_3(3VMK)
?
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




NAP_D_4(2D1C)
IDH_THET8
[Raw transfer]




NAP_A_2(4AJ3)
IDH_ECOLI
[Raw transfer]




GGG_B_7(3TY3)
LYS12_SCHPO
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




NAP_A_3(2E5M)
?
[Raw transfer]




NAP_B_4(2E5M)
?
[Raw transfer]




NAP_B_7(1XKD)
?
[Raw transfer]




TAP_A_2(4AJA)
IDH_ECOLI
[Raw transfer]




NAP_A_2(1AI2)
IDH_ECOLI
[Raw transfer]




ICT_A_6(1XKD)
?
[Raw transfer]




NDO_A_2(1AI3)
IDH_ECOLI
[Raw transfer]




TRS_A_2(2Y3Z)
LEU3_THET8
[Raw transfer]




AMP_I_9(1ISO)
IDH_ECOLI
[Raw transfer]




87 HHSearch 93.8539% -83 - C5 -2D1C 7.0 IDH_THET8
1 PsiBlast_PDB 92.5838% -80 - C5 -2D1C - IDH_THET8 -
21 PsiBlast_CBE 92.2138% -79 - C5 -2D1C 7.2 IDH_THET8
109 Fugue 91.6838% -78 - C5 -2D1C 7.0 IDH_THET8
103 HHSearch 81.2033% -82 - C5 -1TYO - ? -
100 HHSearch 79.7637% -81 - C5 -2IV0 - IDH_ARCFU -
96 HHSearch 78.4533% -75 - C5 -2D4V - ? -
108 HHSearch 75.3136% -78 - C5 -1HQS 3.9 IDH_BACSU
97 HHSearch 75.2935% -85 - C5 -3TY4 2.9 LYS12_SCHPO
89 HHSearch 74.6940% -86 - C5 -3BLX - IDH2_YEAST -
88 HHSearch 74.4035% -85 - C5 -1X0L - HICDH_THET2 -
38 PsiBlast_CBE 74.1435% -79 - C5 -2IV0 - IDH_ARCFU -
2 PsiBlast_PDB 72.9839% -86 - C5 -3BLW - IDH2_YEAST -
23 PsiBlast_CBE 72.9039% -87 - C5 -3BLW - IDH2_YEAST -
25 PsiBlast_CBE 72.8839% -86 - C5 -3BLW - IDH2_YEAST -
24 PsiBlast_CBE 72.7039% -87 - C5 -3BLW - IDH2_YEAST -
22 PsiBlast_CBE 72.7039% -87 - C5 -3BLW - IDH2_YEAST -
101 HHSearch 72.6933% -75 - C5 -3DMS - ? -
27 PsiBlast_CBE 72.6439% -86 - C5 -3BLW - IDH2_YEAST -
28 PsiBlast_CBE 72.6039% -87 - C5 -3BLW - IDH2_YEAST -
56 PsiBlast_CBE 72.0131% -77 - C5 -1P8F 3.4 IDH_ECOLI
60 PsiBlast_CBE 71.8931% -76 - C5 -1CW7 3.2 IDH_ECOLI
58 PsiBlast_CBE 71.7331% -77 - C5 -1AI2 5.7 IDH_ECOLI
51 PsiBlast_CBE 71.7331% -79 - C5 -5ICD 3.4 IDH_ECOLI
55 PsiBlast_CBE 71.6431% -76 - C5 -1PB1 4.0 IDH_ECOLI
57 PsiBlast_CBE 70.8231% -76 - C5 -1AI3 4.7 IDH_ECOLI
52 PsiBlast_CBE 70.4231% -77 - C5 -4AJA 5.3 IDH_ECOLI
48 PsiBlast_CBE 70.3531% -77 - C5 -1HQS 3.2 IDH_BACSU
59 PsiBlast_CBE 70.1031% -77 - C5 -1BL5 3.6 IDH_ECOLI
12 PsiBlast_PDB 69.1134% -74 - C5 -3TY3 1.9 LYS12_SCHPO
102 HHSearch 68.7530% -90 - C5 -2Y3Z 3.5 LEU3_THET8
53 PsiBlast_CBE 68.7531% -73 - C5 -4AJ3 7.3 IDH_ECOLI
8 PsiBlast_PDB 68.7233% -85 - C5 -2E5M 6.7 ?
49 PsiBlast_CBE 67.2831% -69 - C5 -1XKD 6.2 ?
15 PsiBlast_PDB 67.2831% -72 - C5 -1ISO 4.4 IDH_ECOLI
39 PsiBlast_CBE 67.2533% -83 - C5 -2E5M 6.4 ?
46 PsiBlast_CBE 67.1434% -74 - C5 -3TY4 3.4 LYS12_SCHPO
14 PsiBlast_PDB 66.9331% -74 - C5 -1HQS 3.9 IDH_BACSU
13 PsiBlast_PDB 66.1934% -72 - C5 -3TY4 2.9 LYS12_SCHPO
19 PsiBlast_PDB 65.4931% -74 - C5 -1XKD 3.3 ?
47 PsiBlast_CBE 64.9634% -74 - C5 -3TY3 2.3 LYS12_SCHPO