@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0373: (2015-11-30 )
MMFNFPNTRLRRRRSSKWVRNLTSESALSVNDLIFPLFVHDREETTELVSSLPGMKCYSIDGLVSIAQEAEDLGINAVAIFPVVDSKLKSENAEEAYNSDNLICKAIRAIKLKVPGIGIIADVALDPYTTHGHDGILKSNQIDVENDKTVSILCKQALALAKAGCNIVASSDMMDGRVGRIRKVLDDNNLQDVSILSYAVKYCSSFYAPFRQIVGSCVSSNSIDKSGYQMDYRNAREAICEIEMDLNEGADFIMVKPGMPYLDIIKMASDEFNFPIFAYQVSGEYAMIKAATNNGWLDYDKVIYESLVGFKRAGASAIFTYAALDVAKNLR

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PBG_A_4(1OHL)
HEM2_YEAST
[Raw transfer]




PBG_A_3(1E51)
HEM2_HUMAN
[Raw transfer]




FMT_A_5(1W5M)
HEM2_PSEAE
[Raw transfer]




FMT_B_7(1W56)
HEM2_PSEAE
[Raw transfer]




FMT_A_6(1W5P)
HEM2_PSEAE
[Raw transfer]




FMT_B_9(1W5Q)
HEM2_PSEAE
[Raw transfer]




FMT_A_3(1W56)
HEM2_PSEAE
[Raw transfer]




FMT_B_10(1W5M)
HEM2_PSEAE
[Raw transfer]




FMT_B_14(1W5P)
HEM2_PSEAE
[Raw transfer]




FMT_A_3(1W5N)
HEM2_PSEAE
[Raw transfer]




FMT_B_8(1W5N)
HEM2_PSEAE
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




DSB_B_6(2C1H)
HEM2_CHLP8
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




4OX_A_7(1L6Y)
HEM2_ECOLI
[Raw transfer]




4OX_A_2(1GJP)
HEM2_YEAST
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




DSB_B_8(1I8J)
HEM2_ECOLI
[Raw transfer]




SHU_A_2(1H7R)
HEM2_YEAST
[Raw transfer]




KAH_A_2(1H7P)
HEM2_YEAST
[Raw transfer]




AYC_A_2(2WOQ)
HEM2_PSEAE
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




SHF_A_8(1B4E)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1I8J)
HEM2_ECOLI
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_B_5(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_A_3(1YLV)
HEM2_YEAST
[Raw transfer]




DSB_A_4(2C1H)
HEM2_CHLP8
[Raw transfer]




DAV_A_2(1H7O)
HEM2_YEAST
[Raw transfer]




SHO_A_2(1W31)
HEM2_YEAST
[Raw transfer]




6 PsiBlast_PDB 97.3549%-122 - C8 -1W5N 3.6 HEM2_PSEAE
2 PsiBlast_PDB 97.1350%-116 - C8 -2WOQ 3.4 HEM2_PSEAE
22 PsiBlast_CBE 96.9949%-122 - C8 -1W56 3.9 HEM2_PSEAE
5 PsiBlast_PDB 96.9549%-119 - C8 -1W5M 3.5 HEM2_PSEAE
7 PsiBlast_PDB 96.7248%-115 - C8 -1W5O - HEM2_PSEAE -
3 PsiBlast_PDB 96.6249%-117 - C8 -1GZG - HEM2_PSEAE -
1 PsiBlast_PDB 96.5850%-117 - C8 -1B4K 3.7 HEM2_PSEAE
4 PsiBlast_PDB 96.5449%-117 - C8 -1W56 3.6 HEM2_PSEAE
21 PsiBlast_CBE 96.4349%-122 - C8 -1W5M 3.5 HEM2_PSEAE
25 PsiBlast_CBE 96.4148%-124 - C8 -1W5P 3.6 HEM2_PSEAE
26 PsiBlast_CBE 96.3248%-123 - C8 -1W5Q 3.6 HEM2_PSEAE
23 PsiBlast_CBE 96.2949%-122 - C8 -1W5N 3.7 HEM2_PSEAE
69 Fugue 96.1850%-116 - C8 -1B4K 3.7 HEM2_PSEAE
8 PsiBlast_PDB 95.9948%-119 - C8 -1W5P 3.6 HEM2_PSEAE
24 PsiBlast_CBE 95.7248%-121 - C8 -1W5O - HEM2_PSEAE -
48 HHSearch 94.2849%-120 * C8 *1W1Z 2.5 HEM2_CHLP8
32 PsiBlast_CBE 93.6347%-114 - C8 -3OBK - ? -
27 PsiBlast_CBE 93.5150%-118 - C8 -2C1H 1.7 HEM2_CHLP8
29 PsiBlast_CBE 93.4047%-119 - C8 -3OBK - ? -
34 PsiBlast_CBE 93.3047%-118 - C8 -3OBK - ? -
9 PsiBlast_PDB 92.9250%-122 - C8 -1W1Z 2.5 HEM2_CHLP8
10 PsiBlast_PDB 92.9050%-119 - C8 -2C1H 2.3 HEM2_CHLP8
28 PsiBlast_CBE 92.8950%-119 - C8 -1W1Z 3.6 HEM2_CHLP8
49 HHSearch 90.1441%-101 - C8 -1L6S 2.3 HEM2_ECOLI
14 PsiBlast_PDB 89.7640%-105 - C8 -1L6Y 3.7 HEM2_ECOLI
13 PsiBlast_PDB 89.4940%-101 - C8 -1L6S 2.3 HEM2_ECOLI
15 PsiBlast_PDB 89.4740%-101 - C8 -1I8J 2.4 HEM2_ECOLI
12 PsiBlast_PDB 88.4940%-102 - C8 -1B4E 3.7 HEM2_ECOLI
36 PsiBlast_CBE 88.3240% -99 - C8 -1I8J 3.5 HEM2_ECOLI
52 HHSearch 87.8736%-109 - C8 -1H7N 3.7 HEM2_YEAST
41 PsiBlast_CBE 84.4036%-109 - C8 -1OHL 4.1 HEM2_YEAST
18 PsiBlast_PDB 84.3737%-112 - C8 -1E51 3.6 HEM2_HUMAN
43 PsiBlast_CBE 84.1936%-107 - C8 -1H7P 3.5 HEM2_YEAST
46 PsiBlast_CBE 84.1736%-108 - C8 -1GJP 2.3 HEM2_YEAST
53 HHSearch 84.1635%-134 - C8 -1PV8 1.9 HEM2_HUMAN
38 PsiBlast_CBE 83.7536%-108 - C8 -1W31 3.5 HEM2_YEAST
42 PsiBlast_CBE 83.7236%-110 - C8 -1H7R 2.9 HEM2_YEAST
45 PsiBlast_CBE 83.6236%-108 - C8 -1H7O 3.3 HEM2_YEAST
44 PsiBlast_CBE 83.4936%-108 - C8 -1H7N 3.7 HEM2_YEAST
20 PsiBlast_PDB 83.0337%-106 - C8 -1YLV 3.4 HEM2_YEAST
17 PsiBlast_PDB 82.1637%-136 - C8 -1PV8 1.9 HEM2_HUMAN