@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0385: (2015-12-01 )
MSNRKDLLSVLDFTVNDVGNIIELAGQYLENKAANGRILENKTVINLFFEDSTRTLTSFEMAAKSLGANVVTLPVKSSSINKGEDLTDMIKTLNAMNPDYIVVRQKSSGIVNMLAKHVSCLLINAGDGSSEHPTQALADYFVISSHKKQIKNLKIVICGDILHSRVARSNIRLLKMFGAKICLVAPPTLICKHFPEVDSIYYSLIEGIKDADVIMLLRLQKERMNSGCFIPSNREYFYLYGLDSQKLLCAKSNAIVMHPGPINRGIEISSDITDHIILQQVEFGLAIRKAVLHYYRPC

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PAL_B_5(4BJH)
PYRB_AQUAE
[Raw transfer]



PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]



CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]



PAL_A_6(1EKX)
PYRB_ECOLI
[Raw transfer]



PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]



CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]



CP_C_16(3R7F)
PYRB_BACSU
[Raw transfer]



CP_B_11(3R7F)
PYRB_BACSU
[Raw transfer]



FLC_B_5(3D6N)
PYRB_AQUAE
[Raw transfer]
55 HHSearch 97.8837%-124 * C7 *3R7F 4.5 PYRB_BACSU
2 PsiBlast_PDB 95.5336%-119 - C7 -3R7F 4.5 PYRB_BACSU
27 PsiBlast_CBE 95.5136%-119 - C7 -3R7F 3.5 PYRB_BACSU
1 PsiBlast_PDB 94.9736%-117 - C7 -3R7D - PYRB_BACSU -
26 PsiBlast_CBE 94.7036%-113 - C7 -3R7F 4.2 PYRB_BACSU
25 PsiBlast_CBE 94.4836%-109 - C7 -3R7L - PYRB_BACSU -
21 PsiBlast_CBE 94.3436%-111 - C7 -3R7L - PYRB_BACSU -
24 PsiBlast_CBE 94.1536%-111 - C7 -3R7L - PYRB_BACSU -
6 PsiBlast_PDB 93.7537%-133 - C7 -4BJH 6.2 PYRB_AQUAE
3 PsiBlast_PDB 93.3336%-112 - C7 -3R7L - PYRB_BACSU -
5 PsiBlast_PDB 93.3137%-127 - C7 -3D6N 3.7 PYRB_AQUAE
23 PsiBlast_CBE 93.1536%-113 - C7 -3R7L - PYRB_BACSU -
22 PsiBlast_CBE 92.9736%-109 - C7 -3R7L - PYRB_BACSU -
29 PsiBlast_CBE 92.5936%-115 - C7 -3R7D - PYRB_BACSU -
28 PsiBlast_CBE 92.4236%-116 - C7 -3R7D - PYRB_BACSU -
52 PsiBlast_CBE 89.8132%-127 - C7 -2RGW - PYRB_METJA -
53 PsiBlast_CBE 89.6732%-130 - C7 -2RGW - PYRB_METJA -
49 PsiBlast_CBE 89.6632%-129 - C7 -2RGW - PYRB_METJA -
50 PsiBlast_CBE 89.4032%-129 - C7 -2RGW - PYRB_METJA -
40 PsiBlast_CBE 89.1832%-123 - C7 -3E2P - PYRB_METJA -
10 PsiBlast_PDB 88.7832%-116 - C7 -1ML4 8.0 PYRB_PYRAB
14 PsiBlast_PDB 86.3030%-116 - C7 -1EKX 7.6 PYRB_ECOLI
59 HHSearch 84.9932%-121 - C7 -1ML4 7.9 PYRB_PYRAB