@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0393: (2015-12-01 )
MSTINNSEDKKKIIRDLVTKSIKKGGFITFDDINDKLSDENLSSDFIDDTISLLQDSGINILESSEDEEEAPSNSDDSKLDDDDALSNTTTTLVQNDDPVRVYLQDMSSVKLLSRTDEIEIAKKIESEKHNMLRAIIETSVTLKMIKAWRDDLSSGSLLLREIIDLDAIYNSDFNAIPKEESEESIEDDKDSENVSEGTKDDEYCEDDEIDSKKGNDEKENSNEDINSANLNVSILEMENDLLPKVIVALDEIITLADEALTLRKDPSGGLRYQNLYDQIWSIVLQIKLSDTAVAKITQKLYNINRSIMLEEANLISEAKKYNIDRESFLKVYADVLLRYKLEEISSLKSSENQFCFTGELKNKFVKFIDDNFEHIADTLNNIKQHIQEDNVQEFKELIKRTQKHEREVSEAKQGMIKANLRLVVSIAKKYSNRGLALLDLIQEGNIGLMKAVDKFDYKRGYKFSTYGTWWVRQSITRAIPEQSKVVRIPVHMVEIISKINRALRKLTHEMGREPTLEELSMELGMPLERIRKVMKIARDPVSLDAPTGKDDSSTFGDCIEDKRVSKPEDAAILTDLRCITTNLLATLTPKEERIIRMRFGLGKDCKEHTLEEIGCIFKVTRERIRQVESKALRKLKHPCRARKLRGFF

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_H_13(4G7Z)
?
[Raw transfer]

-

NACID_H_8(4OIO)
?
[Raw transfer]

-

NACID_H_8(4OIN)
?
[Raw transfer]

-

NACID_H_8(4G7O)
?
[Raw transfer]

-

NACID_H_8(4Q5S)
?
[Raw transfer]

-

NACID_H_8(4G7H)
?
[Raw transfer]

-

CHAIN_H_8(4Q4Z)
?
[Raw transfer]

-

NACID_H_8(4OIP)
?
[Raw transfer]

-

NACID_H_8(4OIQ)
?
[Raw transfer]

-

NACID_H_8(4OIR)
?
[Raw transfer]

-

NACID_B_2(3UGP)
SIGA_THEAQ
[Raw transfer]

-

NACID_B_2(3UGO)
SIGA_THEAQ
[Raw transfer]

-

NACID_B_2(3UGO)
SIGA_THEAQ
[Raw transfer]

-

NACID_R_15(4G7Z)
?
[Raw transfer]

-

NACID_R_17(4G7O)
?
[Raw transfer]

-

NACID_R_16(4G7H)
?
[Raw transfer]

-

NACID_D_1(4KI2)
SIGA_THEAQ
[Raw transfer]

-

NACID_E_2(4KI2)
SIGA_THEAQ
[Raw transfer]

-

58 Fugue 92.6738% -60 * C9 *4LLG - RPOD_ECOLI -
12 PsiBlast_PDB 80.2450% -68 - C7 -4LLG - RPOD_ECOLI -
20 PsiBlast_PDB 79.5650% -67 - C7 -4ZH3 - ? -
11 PsiBlast_PDB 79.4550% -68 - C7 -4LK1 - RPOD_ECOLI -
19 PsiBlast_PDB 79.4350% -69 - C7 -4ZH2 - ? -
15 PsiBlast_PDB 78.1050% -70 - C7 -4YFK - RPOD_ECOLI -
2 PsiBlast_PDB 78.0350% -78 - C7 -4JKR - RPOD_ECOLI -
16 PsiBlast_PDB 77.9750% -76 - C7 -4YFN - RPOD_ECOLI -
23 PsiBlast_CBE 77.8450% -66 - C7 -4KN4 - RPOD_ECOLI -
24 PsiBlast_CBE 77.3450% -67 - C7 -4KMU - RPOD_ECOLI -
18 PsiBlast_PDB 76.8950% -69 - C7 -4YG2 - RPOA_ECOLI (first) -
13 PsiBlast_PDB 76.6050% -59 - C7 -4MEX - RPOD_ECOLI -
17 PsiBlast_PDB 76.4150% -70 - C7 -4YFX - RPOD_ECOLI -
3 PsiBlast_PDB 76.3450% -69 - C7 -4YLN - RPOD_ECOLI -
14 PsiBlast_PDB 75.7650% -56 - C7 -4MEY - RPOD_ECOLI -
22 PsiBlast_CBE 75.7150% -70 - C7 -4YLP - RPOD_ECOLI -
5 PsiBlast_PDB 74.8150% -65 - C7 -4YLP - RPOD_ECOLI -
4 PsiBlast_PDB 74.5050% -66 - C7 -4YLO - RPOD_ECOLI -
41 PsiBlast_CBE 71.1450% -70 - C7 -4G7O 11.6 ?
44 PsiBlast_CBE 70.9450% -66 - C7 -4G7H 11.5 ?
38 PsiBlast_CBE 70.8650% -67 - C7 -4OIN 11.7 ?
26 PsiBlast_CBE 70.4450% -66 - C7 -4Q4Z 10.8 ?
43 PsiBlast_CBE 70.3450% -66 - C7 -4G7H 11.7 ?
40 PsiBlast_CBE 69.8550% -65 - C7 -4G7Z 9.4 ?
39 PsiBlast_CBE 69.6050% -64 - C7 -4G7Z 10.1 ?
36 PsiBlast_CBE 69.5950% -63 - C7 -4OIP 11.6 ?
35 PsiBlast_CBE 69.5850% -63 - C7 -4OIQ 11.3 ?
37 PsiBlast_CBE 69.5550% -66 - C7 -4OIO 10.9 ?
42 PsiBlast_CBE 69.3450% -66 - C7 -4G7O 11.4 ?
34 PsiBlast_CBE 69.3150% -64 - C7 -4OIR 10.9 ?
25 PsiBlast_CBE 67.8750% -64 - C7 -4Q5S 12.6 ?
47 PsiBlast_CBE 54.8857% -70 - C7 -4KI2 14.1 SIGA_THEAQ
49 PsiBlast_CBE 48.2157% -24 - C7 -3UGP 15.0 SIGA_THEAQ
50 PsiBlast_CBE 47.9857% -28 - C7 -3UGO 15.7 SIGA_THEAQ
72 HHSearch 46.4355% -30 - C7 -3UGO 15.7 SIGA_THEAQ
48 PsiBlast_CBE 45.2257% -26 - C7 -4KI2 12.4 SIGA_THEAQ