@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0396: (2015-12-01 )
MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGCNLITITDDGGGIEKSDLELAFMRHATSKLSDSELIEIKHLGFRGEALSSIAAVSRIKLSSKANGASEAWSISYEGGEKIGELIPYSLPQGTHIEVRDLFFATPNRLKFLKTERAEIQSIVDIVNNLAMINYSIGFTLTSGSKKPLKYAKQTSLFSRLCEVEEEFQDNSLEINEEEDGVRLTGHICKPTVNRGKSDMIYTFVNGRPIKDNLLVSAIRYAYHDFIPSNRYPFATLHLEIPYDQIDVNVHPNKSEVRFQNKRLIYEIVRRGLIKALSTRTGNSAVSNIDRSRCQGIGKETSGLPFDVSESQGNDNHINNGKSRETKSERELYERRPNPFENRLMKESNSPSVGKKDLSERSVLFDSGIQKSLSQAKTVVLEREQIDLIENHPLGFARCQVYNTYIIAEARGKLIIVDQHAAHERLVYECLKQKSSIKRQKLLLSEVVEIKNQAGMEMVEVYKDKLFEMGFDIQINSENKVIVKEIPAILGTIDVKEMLIDIVDRLMEIEDMLPIEDKVNKILATIACHGSIRAGRTMKLEEMNVLLRQMEETPYSGQCNHGRPTHIEMKLSDIEKLFERR

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_6(1NHI)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_9(1NHH)
MUTL_ECOLI
[Raw transfer]



ANP_A_4(1NHJ)
MUTL_ECOLI
[Raw transfer]
43 Fugue 89.6742% -76 - C2 -1B63 10.1 MUTL_ECOLI
21 HHSearch 88.8242% -71 - C2 -1B63 10.1 MUTL_ECOLI
8 PsiBlast_PDB 88.5240% -77 - C2 -1NHI 10.0 MUTL_ECOLI
6 PsiBlast_PDB 87.9340% -73 - C2 -1B63 10.1 MUTL_ECOLI
9 PsiBlast_PDB 87.5740% -75 - C2 -1NHJ 10.1 MUTL_ECOLI
7 PsiBlast_PDB 85.3640% -75 - C2 -1NHH 9.9 MUTL_ECOLI
2 PsiBlast_PDB 84.2941% -83 - C2 -5AKC - ? -
1 PsiBlast_PDB 83.6741% -86 - C2 -5AKB - ? -
5 PsiBlast_PDB 82.1440% -87 - C2 -1BKN - MUTL_ECOLI -
3 PsiBlast_PDB 81.7641% -80 - C2 -5AKD - ? -
4 PsiBlast_PDB 80.2140% -60 - C- -1B62 - MUTL_ECOLI -
14 PsiBlast_PDB 76.9928% -81 - C2 -3H4L - PMS1_YEAST -
23 HHSearch 75.4327% -71 * C2 *3H4L - PMS1_YEAST -
10 PsiBlast_PDB 71.1727% -80 - C2 -1EA6 - PMS2_HUMAN -
11 PsiBlast_PDB 69.8827% -85 - C2 -1H7U - PMS2_HUMAN -
42 Fugue 57.0946% -59 - C2 -1B63 - MUTL_ECOLI -
25 HHSearch 53.2438% -86 - C1 -3NCV - MUTL_NEIG1 -
13 PsiBlast_PDB 52.4438% -85 - C1 -3NCV - MUTL_NEIG1 -
46 Fugue 50.2145% -48 - C2 -1B63 - MUTL_ECOLI -
48 Fugue 49.7333% -86 - C2 -1B63 Error MUTL_ECOLI
49 Fugue 46.9134% -69 - C2 -1B63 Error MUTL_ECOLI