@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0408: (2015-12-01 )
MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPGNIELNSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTHETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPIHGEYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTSKKHVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G3P_B_5(3UWU)
TPIS_STAAR
[Raw transfer]




PGH_B_4(1TPW)
TPIS_CHICK
[Raw transfer]




PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]




G3P_A_3(3UWU)
TPIS_STAAR
[Raw transfer]




PGH_A_3(1TPW)
TPIS_CHICK
[Raw transfer]




PGH_B_4(1TPV)
TPIS_CHICK
[Raw transfer]




PGA_D_4(1SW0)
TPIS_CHICK
[Raw transfer]




PGA_B_4(1SW7)
TPIS_CHICK
[Raw transfer]




PGA_D_4(1SW3)
TPIS_CHICK
[Raw transfer]




PGA_B_4(2YPI)
TPIS_YEAST
[Raw transfer]




PGA_C_3(1SW0)
TPIS_CHICK
[Raw transfer]




PGA_A_3(1SW7)
TPIS_CHICK
[Raw transfer]




PGA_C_3(1SW3)
TPIS_CHICK
[Raw transfer]




PGA_A_3(2J27)
TPIS_TRYBB
[Raw transfer]




PGA_D_4(1SU5)
TPIS_CHICK
[Raw transfer]




PGA_A_3(1BTM)
TPIS_GEOSE
[Raw transfer]




PGA_C_3(1SU5)
TPIS_CHICK
[Raw transfer]




PGA_B_4(1SSG)
TPIS_CHICK
[Raw transfer]




PGH_B_4(7TIM)
TPIS_YEAST
[Raw transfer]




PGA_A_3(2YPI)
TPIS_YEAST
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




PGH_A_3(1TPU)
TPIS_CHICK
[Raw transfer]




PGA_D_4(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




G2H_A_3(3UWZ)
TPIS_STAAR
[Raw transfer]




PGA_B_4(1BTM)
TPIS_GEOSE
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_A_3(4FF7)
TPIS_YEAST
[Raw transfer]




PGA_B_3(1HTI)
TPIS_HUMAN
[Raw transfer]




PGH_B_4(1TPU)
TPIS_CHICK
[Raw transfer]




PGH_A_3(7TIM)
TPIS_YEAST
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




PEP_B_4(4OWG)
TPIS_RABIT
[Raw transfer]




PEP_A_3(4OWG)
TPIS_RABIT
[Raw transfer]




PGA_A_3(1SSG)
TPIS_CHICK
[Raw transfer]




PGH_A_3(1TPV)
TPIS_CHICK
[Raw transfer]




3PG_B_6(3UWW)
TPIS_STAAR
[Raw transfer]




PGH_A_3(3YPI)
TPIS_YEAST
[Raw transfer]




GOL_B_13(4FF7)
TPIS_YEAST
[Raw transfer]




GOL_A_4(2VFE)
TPIS_PLAFA
[Raw transfer]




GOL_A_3(4HHP)
?
[Raw transfer]




PGH_B_4(3YPI)
TPIS_YEAST
[Raw transfer]




GOL_B_6(2VFE)
TPIS_PLAFA
[Raw transfer]




3PG_A_4(3UWW)
TPIS_STAAR
[Raw transfer]




G2H_B_5(3UWZ)
TPIS_STAAR
[Raw transfer]




GOL_A_7(2VXN)
TPIS_LEIME
[Raw transfer]




UVW_A_4(4MVA)
?
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




2PG_B_7(3UWV)
TPIS_STAAR
[Raw transfer]




2PG_A_5(3UWV)
TPIS_STAAR
[Raw transfer]




PEG_B_9(4MVA)
?
[Raw transfer]




CIT_B_5(3M9Y)
TPIS_STAAR
[Raw transfer]




MRD_A_2(4MKN)
?
[Raw transfer]




1 PsiBlast_PDB 93.4939% -98 - C5 -4OHQ - TPIC_ARATH -
22 PsiBlast_CBE 93.4738%-102 - C5 -2BTM 3.3 TPIS_GEOSE
3 PsiBlast_PDB 93.2838%-105 - C5 -2BTM 4.1 TPIS_GEOSE
7 PsiBlast_PDB 92.6837%-104 - C5 -1BTM 3.4 TPIS_GEOSE
62 PsiBlast_CBE 91.8434%-114 - C5 -4Y8F - ? -
24 PsiBlast_CBE 91.6837%-101 - C5 -1BTM 3.1 TPIS_GEOSE
124 HHSearch 90.5835% -99 - C5 -3TA6 - TPIS_MYCTU -
111 HHSearch 89.9140% -93 - C5 -2BTM 4.1 TPIS_GEOSE
85 PsiBlast_CBE 89.2835% -95 - C5 -4GNJ - ? -
35 PsiBlast_CBE 88.7638%-103 - C5 -3UWZ 2.2 TPIS_STAAR
102 Fugue 88.6440% -95 - C5 -2BTM 4.1 TPIS_GEOSE
84 PsiBlast_CBE 88.4635% -98 - C5 -4GNJ - ? -
20 PsiBlast_PDB 87.8935%-104 - C5 -2VOM - TPIS_HUMAN -
40 PsiBlast_CBE 87.8038%-101 - C5 -3UWU 4.3 TPIS_STAAR
113 HHSearch 87.6435% -99 - C5 -1YYA - TPIS_THET8 -
38 PsiBlast_CBE 87.3538%-100 - C5 -3UWV 2.9 TPIS_STAAR
21 PsiBlast_CBE 87.2136% -96 - C5 -1MO0 - TPIS_CAEEL -
39 PsiBlast_CBE 87.1438% -99 - C5 -3UWV 2.0 TPIS_STAAR
49 PsiBlast_CBE 87.0435% -95 - C5 -4IOT - TPIS_ECODH -
45 PsiBlast_CBE 86.9438%-100 - C5 -3M9Y 3.3 TPIS_STAAR
37 PsiBlast_CBE 86.8338%-103 - C5 -3UWW 3.6 TPIS_STAAR
41 PsiBlast_CBE 86.6138%-102 - C5 -3UWU 4.5 TPIS_STAAR
43 PsiBlast_CBE 86.3435% -95 - C5 -4MVA 3.9 ?
36 PsiBlast_CBE 86.1138%-101 - C5 -3UWW 3.4 TPIS_STAAR
83 PsiBlast_CBE 85.8935%-102 - C5 -4MKN 2.1 ?
48 PsiBlast_CBE 85.2436%-100 - C5 -4HHP 3.5 ?
55 PsiBlast_CBE 84.7935% -94 - C5 -4OWG 3.4 TPIS_RABIT
34 PsiBlast_CBE 84.5138%-102 - C5 -3UWZ 2.7 TPIS_STAAR
28 PsiBlast_CBE 84.5135% -92 - C5 -1HTI 3.7 TPIS_HUMAN
54 PsiBlast_CBE 84.1235% -94 - C5 -4OWG 3.3 TPIS_RABIT
42 PsiBlast_CBE 83.8035% -93 - C5 -4MVA 2.1 ?
116 HHSearch 83.7936% -92 - C5 -2J27 2.9 TPIS_TRYBB
68 PsiBlast_CBE 83.6836% -98 - C5 -1SSG 3.0 TPIS_CHICK
80 PsiBlast_CBE 82.9836% -95 - C5 -1TPW 4.7 TPIS_CHICK
79 PsiBlast_CBE 82.6136% -99 - C5 -1TPW 3.9 TPIS_CHICK
101 Fugue 82.5635% -89 - C5 -1IF2 4.5 TPIS_LEIME
52 PsiBlast_CBE 82.4837% -96 - C5 -1SW3 3.3 TPIS_CHICK
53 PsiBlast_CBE 82.3637% -98 - C5 -1SW3 3.5 TPIS_CHICK
118 HHSearch 82.2834% -93 - C5 -1O5X 3.2 TPIS_PLAFA
122 HHSearch 82.2635% -87 - C5 -2VXN 4.5 TPIS_LEIME
81 PsiBlast_CBE 82.1936% -93 - C5 -1TPU 3.8 TPIS_CHICK
67 PsiBlast_CBE 81.8436% -97 - C5 -1SSG 3.9 TPIS_CHICK
82 PsiBlast_CBE 81.7836% -95 - C5 -1TPU 4.0 TPIS_CHICK
65 PsiBlast_CBE 81.4136% -95 - C5 -1SW7 4.3 TPIS_CHICK
72 PsiBlast_CBE 81.1036% -98 - C5 -1SW0 3.3 TPIS_CHICK
66 PsiBlast_CBE 81.0636% -99 - C5 -1SW7 3.4 TPIS_CHICK
78 PsiBlast_CBE 80.8036% -95 - C5 -1SU5 3.5 TPIS_CHICK
89 PsiBlast_CBE 80.6935% -93 - C5 -1TPV 3.7 TPIS_CHICK
50 PsiBlast_CBE 80.5734%-100 - C5 -4FF7 2.3 TPIS_YEAST
71 PsiBlast_CBE 80.5636% -96 - C5 -1SW0 3.3 TPIS_CHICK
88 PsiBlast_CBE 79.7835% -93 - C5 -1TPV 3.0 TPIS_CHICK
77 PsiBlast_CBE 79.0936% -92 - C5 -1SU5 3.3 TPIS_CHICK
51 PsiBlast_CBE 78.9434% -97 - C5 -4FF7 3.5 TPIS_YEAST
27 PsiBlast_CBE 77.8434% -94 - C5 -2YPI 3.9 TPIS_YEAST
11 PsiBlast_PDB 76.7234% -94 - C5 -7TIM 4.1 TPIS_YEAST
26 PsiBlast_CBE 76.6934% -94 - C5 -7TIM 3.7 TPIS_YEAST
33 PsiBlast_CBE 76.4734%-105 - C5 -3YPI 3.3 TPIS_YEAST
19 PsiBlast_PDB 76.3834% -99 - C5 -3YPI 3.9 TPIS_YEAST
95 PsiBlast_CBE 75.4334% -94 - C5 -2VFE 2.6 TPIS_PLAFA
10 PsiBlast_PDB 74.3434% -93 - C5 -2YPI 3.8 TPIS_YEAST
94 PsiBlast_CBE 73.9634% -96 - C5 -2VFE 2.2 TPIS_PLAFA