@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0429: (2015-12-01 )
MKYFLRIDNVRVVGIDVEIKKQSSVCEQMRFRIGRTSLLSTLSRVSGVVERRNAIDILACINIKAQHGSIKLMATDLDISIFASLAADVLTEGEVKVSAHTLHDIVKKLPADLDVNFEVNDQGKLLISYGNANFSLPNVVLNKLPVLEEGDHKYDFTLLNTDLIDLLNKTKFAVSLDDTRYNLNGIYLHTDEQFLYCVATDGHRLSCVKKPKPQNINSEFGVIIPRKTVIELLKVLDDCDEINIKLSDRKIKFTCGKYIIISKLIDGAFPDYKCVIPASQDKQMVVESSKLASVIDRVSVVVSDRIKSIEFSLQEKSLTLHSNSQECSDATEFIEVDYNGAPIEIGFNSRYLLDALSCIKSKCKFSLSDSSSATVITDENDPNVLYIVMPVRT

Atome Classification :

(62 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEG_B_7(4MJR)
DPO3B_ECOLI
[Raw transfer]




2VG_A_9(4OVF)
?
[Raw transfer]




2VF_A_3(4OVG)
?
[Raw transfer]




2VG_B_15(4OVF)
?
[Raw transfer]




2J2_A_6(4N9A)
DPO3B_ECOLI
[Raw transfer]




2VD_A_7(4PNU)
?
[Raw transfer]




2VF_B_13(4OVG)
?
[Raw transfer]




2VM_A_3(4PNW)
?
[Raw transfer]




0LA_A_6(4MJR)
DPO3B_ECOLI
[Raw transfer]




27O_B_9(4MJP)
DPO3B_ECOLI
[Raw transfer]




2VD_B_12(4PNU)
?
[Raw transfer]




2VE_A_7(4OVH)
?
[Raw transfer]




SFK_A_9(4K3K)
DPO3B_ECOLI
[Raw transfer]




27R_A_3(4MJQ)
DPO3B_ECOLI
[Raw transfer]




2VM_B_7(4PNW)
?
[Raw transfer]




4FC_A_3(4N98)
DPO3B_ECOLI
[Raw transfer]




743_A_3(3QSB)
DPO3B_ECOLI
[Raw transfer]




743_B_4(3QSB)
DPO3B_ECOLI
[Raw transfer]




PHE_B_13(4K3L)
DPO3B_ECOLI
[Raw transfer]




CHAIN_H_7(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

PHE_A_4(4K3L)
DPO3B_ECOLI
[Raw transfer]




6NI_A_3(4N96)
DPO3B_ECOLI
[Raw transfer]




LEU_A_3(4K3L)
DPO3B_ECOLI
[Raw transfer]




2HO_A_3(4N94)
DPO3B_ECOLI
[Raw transfer]




2HU_A_3(4N97)
DPO3B_ECOLI
[Raw transfer]




CHAIN_C_3(3Q4K)
DPO3B_ECOLI
[Raw transfer]

-

322_A_3(3D1G)
DPO3B_ECOLI
[Raw transfer]




322_B_4(3D1G)
DPO3B_ECOLI
[Raw transfer]




LEU_B_12(4K3L)
DPO3B_ECOLI
[Raw transfer]




2HQ_A_7(4N95)
DPO3B_ECOLI
[Raw transfer]




CHAIN_D_4(3Q4K)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_E_3(4K3M)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_C_3(4K74)
?
[Raw transfer]

-

ACE_A_11(4K3L)
DPO3B_ECOLI
[Raw transfer]




CHAIN_P_3(3D1E)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_D_4(4K74)
?
[Raw transfer]

-

CHAIN_P_3(3D1F)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_Q_4(3D1F)
DPO3B_ECOLI
[Raw transfer]

-

ACE_B_26(4K3L)
DPO3B_ECOLI
[Raw transfer]




CHAIN_E_3(4K3O)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_Z_18(4TSZ)
?
[Raw transfer]

-

CHAIN_E_3(4K3R)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_D_4(3Q4L)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_T_8(4TSZ)
?
[Raw transfer]

-

CHAIN_S_6(4TSZ)
?
[Raw transfer]

-

CHAIN_R_4(4TSZ)
?
[Raw transfer]

-

CHAIN_K_10(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_Q_2(4TSZ)
?
[Raw transfer]

-

CHAIN_X_14(4TSZ)
?
[Raw transfer]

-

CHAIN_U_10(4TSZ)
?
[Raw transfer]

-

CHAIN_Y_16(4TSZ)
?
[Raw transfer]

-

CHAIN_E_3(4K3P)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_V_12(4TSZ)
?
[Raw transfer]

-

CHAIN_L_11(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_J_9(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_E_3(4K3Q)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_C_3(1OK7)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_I_8(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_C_3(3Q4L)
DPO3B_ECOLI
[Raw transfer]

-

33 PsiBlast_CBE 95.5635%-125 - C6 -4TSZ 7.7 ?
32 PsiBlast_CBE 95.4135%-126 - C6 -4TSZ 7.8 ?
35 PsiBlast_CBE 95.1635%-126 - C6 -4TSZ 8.2 ?
34 PsiBlast_CBE 95.1635%-126 - C6 -4TSZ 7.8 ?
25 PsiBlast_CBE 95.1435%-126 - C6 -4TSZ - ? -
26 PsiBlast_CBE 94.9935%-125 - C6 -4TSZ - ? -
24 PsiBlast_CBE 94.9935%-126 - C6 -4TSZ - ? -
31 PsiBlast_CBE 94.7835%-125 - C6 -4TSZ 7.8 ?
27 PsiBlast_CBE 94.5135%-126 - C6 -4TSZ - ? -
19 PsiBlast_PDB 94.3632%-123 - C6 -4K3P 6.4 DPO3B_ECOLI
58 PsiBlast_CBE 94.2232%-125 - C6 -4N95 3.5 DPO3B_ECOLI
2 PsiBlast_PDB 94.2135%-126 - C6 -4TSZ 7.7 ?
18 PsiBlast_PDB 94.0832%-128 - C6 -4K3O 5.3 DPO3B_ECOLI
1 PsiBlast_PDB 94.0135%-126 - C6 -4TR8 - ? -
62 PsiBlast_CBE 93.9832%-125 - C6 -4MJR 4.2 DPO3B_ECOLI
29 PsiBlast_CBE 93.9835%-125 - C6 -4TSZ 7.7 ?
28 PsiBlast_CBE 93.9735%-124 - C6 -4TSZ 7.7 ?
93 PsiBlast_CBE 93.8432%-123 - C6 -3F1V - DPO3B_ECOLI -
67 PsiBlast_CBE 93.5532%-125 - C6 -4K74 4.5 ?
9 PsiBlast_PDB 93.5032%-123 - C6 -3BEP - DPO3B_ECOLI -
30 PsiBlast_CBE 93.4535%-126 - C6 -4TSZ 7.7 ?
20 PsiBlast_PDB 93.2932%-125 - C6 -4K3Q 5.7 DPO3B_ECOLI
45 PsiBlast_CBE 93.2832%-124 - C6 -4OVG 5.0 ?
10 PsiBlast_PDB 93.2732%-121 - C6 -3D1E 6.4 DPO3B_ECOLI
17 PsiBlast_PDB 93.2132%-124 - C6 -4K3M 4.3 DPO3B_ECOLI
15 PsiBlast_PDB 93.1932%-124 - C6 -4K3K 3.8 DPO3B_ECOLI
47 PsiBlast_CBE 93.1132%-125 - C6 -4OVF 4.8 ?
91 PsiBlast_CBE 92.9432%-128 - C6 -3Q4L 8.8 DPO3B_ECOLI
72 PsiBlast_CBE 92.8632%-124 - C6 -4K3R 4.9 DPO3B_ECOLI
87 PsiBlast_CBE 92.8132%-123 - C6 -3D1F 4.8 DPO3B_ECOLI
90 PsiBlast_CBE 92.8032%-128 - C6 -3Q4L 8.0 DPO3B_ECOLI
52 PsiBlast_CBE 92.7532%-126 - C6 -4N98 4.3 DPO3B_ECOLI
56 PsiBlast_CBE 92.6432%-127 - C6 -4N96 3.6 DPO3B_ECOLI
83 PsiBlast_CBE 92.4332%-123 - C6 -3Q4J 7.5 DPO3B_ECOLI
61 PsiBlast_CBE 92.4332%-123 - C6 -4MJR Error DPO3B_ECOLI
37 PsiBlast_CBE 92.4232%-125 - C6 -4PNW 4.1 ?
14 PsiBlast_PDB 92.4232%-126 - C6 -3Q4K 7.2 DPO3B_ECOLI
89 PsiBlast_CBE 92.3532%-122 - C6 -1OK7 6.1 DPO3B_ECOLI
80 PsiBlast_CBE 92.2532%-123 - C6 -3Q4K 4.8 DPO3B_ECOLI
11 PsiBlast_PDB 92.2432%-124 - C6 -3D1F 6.3 DPO3B_ECOLI
82 PsiBlast_CBE 92.2132%-125 - C6 -3Q4J 7.7 DPO3B_ECOLI
49 PsiBlast_CBE 92.2132%-124 - C6 -4N9A 4.4 DPO3B_ECOLI
77 PsiBlast_CBE 92.1532%-122 - C6 -4K3L 3.0 DPO3B_ECOLI
85 PsiBlast_CBE 91.9932%-125 - C6 -3Q4J 7.2 DPO3B_ECOLI
64 PsiBlast_CBE 91.9732%-122 - C6 -4MJQ 4.9 DPO3B_ECOLI
43 PsiBlast_CBE 91.9432%-123 - C6 -4OVH 5.5 ?
36 PsiBlast_CBE 91.9032%-128 - C6 -4PNW 4.9 ?
40 PsiBlast_CBE 91.8732%-125 - C6 -4PNU 5.0 ?
86 PsiBlast_CBE 91.8332%-123 - C6 -3D1G 4.1 DPO3B_ECOLI
54 PsiBlast_CBE 91.7732%-119 - C6 -4N97 3.7 DPO3B_ECOLI
84 PsiBlast_CBE 91.7532%-122 - C6 -3Q4J 7.5 DPO3B_ECOLI
44 PsiBlast_CBE 91.6632%-124 - C6 -4OVG 3.7 ?
41 PsiBlast_CBE 91.6432%-127 - C6 -4PNU 6.3 ?
60 PsiBlast_CBE 91.6032%-121 - C6 -4N94 3.7 DPO3B_ECOLI
12 PsiBlast_PDB 91.5932%-122 - C6 -3D1G 4.7 DPO3B_ECOLI
65 PsiBlast_CBE 91.5032%-124 - C6 -4MJP 5.6 DPO3B_ECOLI
79 PsiBlast_CBE 91.4532%-124 - C6 -3QSB 5.4 DPO3B_ECOLI
4 PsiBlast_PDB 91.2232%-119 - C6 -3QSB 5.2 DPO3B_ECOLI
16 PsiBlast_PDB 91.1632%-128 - C6 -4K3L 3.1 DPO3B_ECOLI
81 PsiBlast_CBE 91.0932%-126 - C6 -3Q4J 7.3 DPO3B_ECOLI
46 PsiBlast_CBE 91.0232%-125 - C6 -4OVF 4.3 ?
68 PsiBlast_CBE 90.5232%-126 - C6 -4K74 4.7 ?