@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0436: (2015-12-01 )
MARNNPNIKLLYIRDLFAKECKEIEEYCILGKKQHIQISPEEGKLLSLFIKIHKVRSIVEIGTLYGYSSICMAKALPEYGHIYTIENNPKHFKIAKKNFNAFNMSNKITLIVGNALEKLAELSAKAPYDMIFIDADKAGYPKYLDWAESYIKQDGLIVADNTLLLNTVFLKSPPKEVLEKSWRAMREFNYRLSDEKKYCSILIPTDEGMTIALKLT

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_D_17(4PCA)
?
[Raw transfer]



SAH_C_12(4PCA)
?
[Raw transfer]



SAH_A_6(4PCA)
?
[Raw transfer]



SAH_A_6(4PCA)
?
[Raw transfer]



SAM_A_3(4PCL)
?
[Raw transfer]



SAH_B_9(4PCA)
?
[Raw transfer]



SAH_C_10(2HNK)
?
[Raw transfer]



SAM_B_6(4PCL)
?
[Raw transfer]



SAH_A_7(4OA5)
?
[Raw transfer]



SAH_A_3(3CBG)
?
[Raw transfer]



SAH_A_3(3CBG)
?
[Raw transfer]



SAH_A_5(2HNK)
?
[Raw transfer]



SAH_A_5(2HNK)
?
[Raw transfer]



FER_A_4(3CBG)
?
[Raw transfer]



EDO_B_4(4OA8)
?
[Raw transfer]
25 PsiBlast_CBE 93.6447%-111 - C1 -4OA8 3.0 ?
28 PsiBlast_CBE 92.9547%-113 - C1 -4OA5 - ? -
3 PsiBlast_PDB 92.4747%-109 - C1 -4OA8 - ? -
1 PsiBlast_PDB 92.2647%-108 - C1 -4PCA 7.3 ?
4 PsiBlast_PDB 91.9947%-113 - C1 -4OA5 7.2 ?
55 Fugue 91.7941% -99 - C1 -4PCA 8.1 ?
22 PsiBlast_CBE 91.6847%-111 - C1 -4PCA 7.3 ?
2 PsiBlast_PDB 91.6247%-111 - C1 -4PCL 8.4 ?
21 PsiBlast_CBE 91.4047%-109 - C1 -4PCL 8.6 ?
26 PsiBlast_CBE 91.3347%-113 - C1 -4OA5 - ? -
54 Fugue 90.5541% -98 - C1 -4OA5 - ? -
24 PsiBlast_CBE 89.9447%-110 - C1 -4PCA 7.6 ?
23 PsiBlast_CBE 89.7447%-105 - C1 -4PCA 7.7 ?
32 PsiBlast_CBE 84.2032%-104 - C1 -2HNK 5.3 ?
10 PsiBlast_PDB 83.8032%-106 - C1 -2HNK 4.9 ?
43 HHSearch 80.0033%-102 * C1 *2HNK 4.9 ?
16 PsiBlast_PDB 77.5427%-106 - C1 -3C3Y - ? -
37 HHSearch 76.9529% -90 - C1 -3DUW - ? -
5 PsiBlast_PDB 74.6035%-102 - C1 -3CBG 5.0 ?
41 HHSearch 74.1128% -88 - C1 -3NTV - ? -
38 HHSearch 74.0132% -87 - C1 -3CBG 5.0 ?