Study : Wbm0469 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: U5P_A_5(3BK2) / Model_7(3BK2/A) = [4.3] Download669.75-4.74MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPGDIVNLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV
Complex: U5P_A_5(3BK2) / Model_63(3BK2/A) = [4.3] Download608.53-4.74MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPGDIVNLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV
Complex: CHAIN_B_2(3T3N) / Model_4(3T3N/A) = [8.9] Download--MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPGDIVNLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV
Complex: CHAIN_B_2(3T3O) / Model_5(3T3O/A) = [9.1] Download--MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPGDIVNLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV
Complex: NACID_E_3(5A0V) / Model_2(5A0V/A) = [10.5] Download--MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPGDIVNLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV
Consensus
[pKd Mean = 7.42]
-639
(s=30)
-4
(s=0)
MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPGDIVNLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV