@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0480: (2015-12-01 )
MDNTIIRKYDIRGVVGKDLQINDGYEIGRKFGQTVANVCVGYDSRIDSPSIEKELIRGLTLSGANVIRIGLCSSPMLYAATQITQADLGIIITASHNPSDYNGFKFFSSEKVYLDQETKEIISSSIKNSTKIGSLINVNIYSQYIRVLKSAVKNNSTQKLKIAWDCGNSPASGILRYIETILPGHTHIIINNSIDGVFPLHNPDPIEEKNLVQLIDIVKQDKCDLGIALDGDSDRVRLIDNKGSIVSNDHLFMIFVREVLEECPRSKVIANVKMSMKVHDFVSKLGGQVVTCATGHSLVKKKMVEEGAKFAGELSGHFFFSELGFDDGLYSAIKAIDILLKQSQGLSQMIEDLPKLYITHEVKIVVKDEKKFQIIELIKKTLEQQNIAFSDLDGIKVTGNDNKGWWLLRVSNTQNCITARCEGDTLEDFELTKKVLFRYIDKAKSLDCNLS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G16_X_2(2FKM)
ALGC_PSEAE
[Raw transfer]




G6P_X_2(1P5G)
ALGC_PSEAE
[Raw transfer]




G1P_X_2(1P5D)
ALGC_PSEAE
[Raw transfer]




G1P_X_2(1P5D)
ALGC_PSEAE
[Raw transfer]




M1P_X_2(1PCJ)
ALGC_PSEAE
[Raw transfer]




X1P_X_3(2H5A)
ALGC_PSEAE
[Raw transfer]




G1P_X_2(3BKQ)
ALGC_PSEAE
[Raw transfer]




M6P_X_3(1PCM)
ALGC_PSEAE
[Raw transfer]




R1P_X_2(2H4L)
ALGC_PSEAE
[Raw transfer]




G16_A_2(2FKF)
ALGC_PSEAE
[Raw transfer]




TLA_X_3(1K2Y)
ALGC_PSEAE
[Raw transfer]




TLA_A_3(4MRQ)
ALGC_PSEAE
[Raw transfer]




EDO_A_14(4MRQ)
ALGC_PSEAE
[Raw transfer]




2 PsiBlast_PDB 97.0836% -81 - C2 -1K2Y 2.9 ALGC_PSEAE
43 Fugue 96.0236% -80 - C2 -1K2Y - ALGC_PSEAE -
11 PsiBlast_PDB 95.6436% -82 - C2 -4IL8 - ALGC_PSEAE -
14 PsiBlast_PDB 95.4936% -84 - C2 -1K35 - ALGC_PSEAE -
12 PsiBlast_PDB 95.4736% -81 - C2 -3BKQ 4.9 ALGC_PSEAE
8 PsiBlast_PDB 95.3636% -80 - C2 -1PCM 5.6 ALGC_PSEAE
1 PsiBlast_PDB 95.3037% -80 - C2 -4MRQ 3.7 ALGC_PSEAE
13 PsiBlast_PDB 95.1436% -83 - C2 -3C04 - ALGC_PSEAE -
3 PsiBlast_PDB 95.1036% -81 - C2 -2FKF 4.3 ALGC_PSEAE
4 PsiBlast_PDB 94.4336% -79 - C2 -2FKM 5.1 ALGC_PSEAE
5 PsiBlast_PDB 94.4136% -78 - C2 -1P5D 6.0 ALGC_PSEAE
6 PsiBlast_PDB 94.3936% -78 - C2 -1P5G 6.0 ALGC_PSEAE
23 HHSearch 94.3438% -78 - C2 -1P5D 6.0 ALGC_PSEAE
10 PsiBlast_PDB 94.0336% -77 - C2 -2H5A 5.3 ALGC_PSEAE
9 PsiBlast_PDB 93.8736% -78 - C2 -2H4L 4.3 ALGC_PSEAE
7 PsiBlast_PDB 93.3736% -78 - C2 -1PCJ 4.9 ALGC_PSEAE
22 HHSearch 90.4629% -83 * C2 *1WQA - ? -
25 HHSearch 88.0232% -81 - C2 -3UW2 - ? -
15 PsiBlast_PDB 87.0332% -75 - C2 -3UW2 - ? -
16 PsiBlast_PDB 85.1329% -77 - C2 -1WQA - ? -