@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0520: (2015-12-02 )
MNIHEYQAKEILHKFNVPVPKGFVAMSAEEAETKINQLKSDVLVVKAQIHAGGRGKAGGVKLAKSAEEAQQFVKGMLGITLVTHQTGPNGQQVRRVYIEEGSSIKKEYYLSIVIDPKLSRPAFIFSSEGGMDIEEVAKNFPTKIVKLDIDYAADFASFDSRKLSNIFNLSPEQIEKITNVAKNIYDTFIATDANQIEINPLVETNSGDFIALDAKISFDDNALYRHPEIVELRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVEAAKGMSIKVPLVVRLSGTNFEKGKRILEESGLNIIAADELDEAAQKIVKEVE

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTP_B_5(2FP4)
SUCB2_PIG
[Raw transfer]



GTP_B_5(2FP4)
SUCB2_PIG
[Raw transfer]



GDP_E_5(2FPG)
SUCB2_PIG
[Raw transfer]
3 PsiBlast_PDB 92.8349%-100 - C3 -1JKJ - SUCC_ECOLI -
4 PsiBlast_PDB 92.5749%-102 - C3 -2NU6 - SUCC_ECOLI -
5 PsiBlast_PDB 92.5149%-100 - C3 -2NU7 - SUCC_ECOLI -
2 PsiBlast_PDB 92.2249%-102 - C3 -2SCU - SUCC_ECOLI -
61 Fugue 92.1448%-102 - C3 -2SCU - SUCC_ECOLI -
27 PsiBlast_CBE 91.7649%-100 - C3 -2NU7 - SUCC_ECOLI -
21 PsiBlast_CBE 91.6249%-104 - C3 -2SCU - SUCC_ECOLI -
6 PsiBlast_PDB 91.6149% -98 - C3 -2NU8 - SUCC_ECOLI -
38 HHSearch 91.3849% -99 - C3 -2NU8 - SUCC_ECOLI -
23 PsiBlast_CBE 91.3749% -99 - C3 -2NU9 - SUCC_ECOLI -
25 PsiBlast_CBE 91.3649% -99 - C3 -2NU9 - SUCC_ECOLI -
26 PsiBlast_CBE 91.3149% -98 - C3 -2NU8 - SUCC_ECOLI -
30 PsiBlast_CBE 91.3049% -97 - C3 -1JKJ - SUCC_ECOLI -
7 PsiBlast_PDB 91.3049% -99 - C3 -2NU9 - SUCC_ECOLI -
32 PsiBlast_CBE 91.2949%-104 - C3 -1CQI - SUCC_ECOLI -
24 PsiBlast_CBE 91.2549%-100 - C3 -2NU9 - SUCC_ECOLI -
9 PsiBlast_PDB 91.0949%-105 - C3 -1CQI - SUCC_ECOLI -
10 PsiBlast_PDB 91.0849%-101 - C3 -1CQJ - SUCC_ECOLI -
31 PsiBlast_CBE 90.8749%-101 - C3 -1CQJ - SUCC_ECOLI -
11 PsiBlast_PDB 90.7348%-102 - C3 -1JLL - SUCC_ECOLI -
41 HHSearch 85.7344% -98 * C3 *2FP4 6.1 SUCB2_PIG
12 PsiBlast_PDB 84.3444% -94 - C3 -2FP4 6.1 SUCB2_PIG
13 PsiBlast_PDB 83.3144% -94 - C3 -2FPG 4.7 SUCB2_PIG