@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0527: (2015-12-02 )
MKKMEACYSFDDILLLPAYSNILPCNADTKTYLTNSIELNIPLISSAMDTVTESDFAITIAQHGGIGCIHKNLSVDEQVSEVRRVKKYENWIVYNPITISPDKTVAEAISLMKKHDYSGIPVVDQRKLVGVLTNRDIRFIEDQNMSIKVSEVMTKEKLVTIREQEVDSASAMKLLHENRIEKLLVIDENFCCIGLITVKDIEKYNRYPNSCKDSKGRLRVAAAVGTGKKDGIERCEALIGEEIDVIIVDTAHGHSENVIDTIKEIKTMYPNTQLVGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRVVTGVGVPQFSAIQSVAETCKARKVRLIADGGIKYSGDIAKAIAAGADSVMIGSIFAGTDESPGEIIMYKGRAYKGYRGMGSISAMKQGSASRYFQDKDSKLKLVPQGVEGRVPFKGPASGVIHQLIGGLQAAMGYTGNRNIEEMKKNCRFVIITASGLRESHAHDIIITQEAPNYAYQVFNLLTDSDA

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_8(4X3Z)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




NAJ_A_4(4QNE)
?
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




IMP_B_12(4MY8)
?
[Raw transfer]




IMP_B_6(5AHM)
?
[Raw transfer]




IMP_C_19(4MY8)
?
[Raw transfer]




IMP_A_3(5AHM)
?
[Raw transfer]




Q21_A_6(4MY8)
?
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




Q21_B_13(4MY8)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




IMP_B_6(4AF0)
?
[Raw transfer]




IMP_A_4(4AF0)
?
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




39H_A_6(4QM1)
?
[Raw transfer]




39H_C_9(4QM1)
?
[Raw transfer]




39H_B_8(4QM1)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




39H_C_10(4QM1)
?
[Raw transfer]




106 HHSearch 96.6455% -91 - C3 -1ZFJ 6.6 IMDH_STRPY
9 PsiBlast_PDB 95.5748%-100 - C3 -4FXS - ? -
8 PsiBlast_PDB 95.5352% -91 - C3 -1ZFJ - IMDH_STRPY -
5 PsiBlast_PDB 95.4655% -98 - C3 -4DQW - ? -
2 PsiBlast_PDB 94.1853% -88 - C3 -3TSB - ? -
105 HHSearch 93.6053%-101 - C3 -3USB 4.7 ?
6 PsiBlast_PDB 93.0255% -93 - C3 -4AVF - ? -
3 PsiBlast_PDB 92.5853% -95 - C3 -3TSD - ? -
21 PsiBlast_CBE 92.4555%-100 - C3 -4DQW - ? -
7 PsiBlast_PDB 91.8155% -96 - C3 -5AHN - ? -
10 PsiBlast_PDB 91.7751% -99 - C3 -3USB - ? -
4 PsiBlast_PDB 91.1955% -90 - C3 -3ZFH - ? -
109 HHSearch 89.4955% -91 - C3 -1VRD - ? -
1 PsiBlast_PDB 88.4053% -91 - C3 -1VRD - ? -
11 PsiBlast_PDB 87.5349% -83 - C3 -2CU0 - IMDH_PYRHO -
108 HHSearch 87.5249% -82 - C3 -2CU0 6.8 IMDH_PYRHO
111 HHSearch 85.0352% -97 - C3 -1EEP - IMDH_BORBU -
73 PsiBlast_CBE 82.7437% -85 - C3 -4AF0 7.0 ?
72 PsiBlast_CBE 82.5838% -85 - C3 -4AF0 7.0 ?
112 HHSearch 82.5751% -99 - C3 -3FFS - IMDH_CRYPV -
107 HHSearch 80.4730% -82 - C3 -1ME8 6.6 IMDH_TRIFO
70 PsiBlast_CBE 74.2252% -81 - C3 -5AHM 6.5 ?
69 PsiBlast_CBE 73.9452% -78 - C3 -5AHM 6.3 ?
32 PsiBlast_CBE 71.3853% -88 - C3 -4QM1 5.2 ?
42 PsiBlast_CBE 71.0853% -89 - C3 -4MYA 5.4 ?
29 PsiBlast_CBE 70.9755% -88 - C3 -4FO4 6.3 ?
52 PsiBlast_CBE 70.4053% -92 - C3 -4MY8 6.2 ?
53 PsiBlast_CBE 70.2053% -88 - C3 -4MY8 6.3 ?
17 PsiBlast_PDB 70.0955% -86 - C3 -4X3Z 5.9 ?
24 PsiBlast_CBE 69.9755% -87 - C3 -4X3Z 5.2 ?
15 PsiBlast_PDB 69.7755% -96 - C3 -4QQ3 6.9 ?
20 PsiBlast_PDB 69.6553% -87 - C3 -4MYA 5.3 ?
18 PsiBlast_PDB 69.1353% -87 - C3 -4MY8 5.1 ?
26 PsiBlast_CBE 69.1255% -88 - C3 -4IX2 5.5 ?
25 PsiBlast_CBE 68.7955% -89 - C3 -4QNE 5.7 ?
33 PsiBlast_CBE 68.7153% -87 - C3 -4QM1 4.9 ?
16 PsiBlast_PDB 68.7155% -86 - C3 -4QNE 4.9 ?
31 PsiBlast_CBE 68.7053% -87 - C3 -4QM1 4.7 ?
27 PsiBlast_CBE 68.7055% -88 - C3 -4IX2 5.7 ?
30 PsiBlast_CBE 68.6053% -84 - C3 -4QM1 5.0 ?
28 PsiBlast_CBE 68.4155% -84 - C3 -4IX2 4.5 ?