@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0539: (2015-12-02 )
MISSIQEPNELRKRLQGFYRTDEKSYARYLVEKIELSADSKNRIYNIAKQVVEKIKGSKLDVIDSFMQQYSLSSDEGVALMCLAESLLRIPDDYTIDELIKDKIANQEWSKHLGRSSSLFVNASTWSLMIGSSVLRGNEEGPRFYHVISKLLKNFGEPIIRKAVKQAMLMLGKHFIVGETIEEALESIRSDSHSKFLCSFSILGEAAHTAENAEEYFNSYMHAIKAIGESTDTSDCFKSHGISIKFSSLHPRYEFCQFGNIAGELKTKVLELCHEAKKYNISLCIDAEESERLEMSLVLFEQLRLDESLSQWEGLGLAVQAYQKRALSVLDFVEDVAIRSKHKIMVRLVKGAYWDSEIKRTQELGLSSYPVFTRKSYTDVCYLACARKLLSKASHFYPCFGTHNAYTFATIVELADKNHPGFEFQRLHGIGKNLYDYAMSELATSIDCRIYAPVGKHSDLLPYLIRRLLENGANSSFVNQINGSDVKIEELISDPLEKAKSLGYEPHSSIPLPQDIFGEERKNSLGMDIGDSVTVSQFANDIKELSGKKWQVGPIINGESLFDSAKFIEVVNPAHLENVIGEVSNTTSDQALNALEVAHSAFIKWQNVSAEKRTVYLEKAADLLEEKMKELIYILIVEAGKVLSDAITEVREAVDFLRYYAIIARNELSNWKKLQGPTGEDNFIFFEGRGVFLCISPWNFPLAIFIGQVSAALAAGNAVLAKPAEQTPIIAYEAVKILHEAGIPKDVLHLIPGDGQYLGKALVPDNRISGVAFTGSTQTAQMINRMLASRNGPIVPFIAETGGLNAMIVDSSALLEQVTVDVLLSAFRSAGQRCSALKVLFIQEDIAEKQIKMICDAAQELKVGDPIQLSTDIGPIIDKASIDMLTKYTEKMSGDRDSSLLSKVPMDTNSHNGHFFSPYIYEIQKISQLKQEVFGPILHIIRFNKSQLNGVISDINNTGYGLTFSLQSRIQNQIDSISRKISVGNVYINRDQVGATVGVQPFGGRGLSGTGPKAGGPNYLQRFSTEKVVSVNTAAFGGNTKLMCLD

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ALA_B_11(2EIT)
?
[Raw transfer]



ALA_A_9(2EIT)
?
[Raw transfer]



DPR_A_7(2EJ6)
?
[Raw transfer]



NAD_B_12(2EIT)
?
[Raw transfer]



GLU_B_4(2BHQ)
?
[Raw transfer]



PRO_B_8(2EIW)
?
[Raw transfer]



GLU_A_3(2BHQ)
?
[Raw transfer]



NAD_A_10(2EII)
?
[Raw transfer]



NAD_B_13(2J5N)
?
[Raw transfer]



NAD_B_12(2EII)
?
[Raw transfer]



NAD_A_10(2EIT)
?
[Raw transfer]



NAD_A_3(2BHP)
?
[Raw transfer]



DPR_B_8(2EJ6)
?
[Raw transfer]



NAD_A_5(2J5N)
?
[Raw transfer]



NAD_B_12(2EHU)
?
[Raw transfer]



NAD_A_10(2EHU)
?
[Raw transfer]



NAP_A_9(2EHQ)
?
[Raw transfer]



NAP_B_10(2EHQ)
?
[Raw transfer]



NAD_A_3(2BJK)
?
[Raw transfer]



NAD_B_10(2BJK)
?
[Raw transfer]



NAD_B_15(2BHP)
?
[Raw transfer]



GLY_B_4(2J5N)
?
[Raw transfer]



GLY_A_3(2J5N)
?
[Raw transfer]



FLC_A_3(2IY6)
?
[Raw transfer]



FLC_B_11(2IY6)
?
[Raw transfer]
67 Fugue 96.3948% -89 - C2 -4Q71 - ? -
1 PsiBlast_PDB 95.5146% -90 - C2 -3HAZ - ? -
45 HHSearch 95.4548% -88 - C2 -3HAZ - ? -
21 PsiBlast_CBE 62.0936% -83 - C2 -3QAN - ROCA1_BACHD -
9 PsiBlast_PDB 61.6136% -83 - C2 -3QAN - ROCA1_BACHD -
17 PsiBlast_PDB 61.2033% -82 - C2 -2EJ6 3.1 ?
19 PsiBlast_PDB 61.1333% -80 - C2 -2J5N 9.7 ?
39 PsiBlast_CBE 61.0633% -81 - C2 -2EHQ 9.9 ?
31 PsiBlast_CBE 61.0033% -80 - C2 -2J5N 9.4 ?
34 PsiBlast_CBE 60.8433% -80 - C2 -2EIT 8.4 ?
36 PsiBlast_CBE 60.8133% -79 - C2 -2EII 9.1 ?
20 PsiBlast_PDB 60.7433% -80 - C2 -2EIT 9.1 ?
18 PsiBlast_PDB 60.6733% -79 - C2 -2BHQ 3.7 ?
16 PsiBlast_PDB 60.6433% -79 - C2 -2EHQ 10.0 ?
33 PsiBlast_CBE 60.6233% -80 - C2 -2EJ6 2.8 ?
15 PsiBlast_PDB 60.5933% -80 - C2 -2IY6 3.5 ?
35 PsiBlast_CBE 60.5433% -80 - C2 -2EII 9.1 ?
14 PsiBlast_PDB 60.4833% -78 - C2 -2BJK 9.5 ?
38 PsiBlast_CBE 60.4433% -79 - C2 -2EHU 9.3 ?
29 PsiBlast_CBE 60.3833% -81 - C2 -2EIW 3.4 ?
42 PsiBlast_CBE 60.3433% -78 - C2 -2BHP 9.4 ?
13 PsiBlast_PDB 60.3433% -79 - C2 -2BHP 9.1 ?
37 PsiBlast_CBE 60.3333% -80 - C2 -2EHU 9.2 ?
32 PsiBlast_CBE 60.3233% -80 - C2 -2IY6 3.4 ?
41 PsiBlast_CBE 60.2733% -80 - C2 -2BHQ 3.7 ?
40 PsiBlast_CBE 60.0833% -79 - C2 -2BJK 9.4 ?