@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0543: (2015-12-02 )
MENKLREIVLDTETTGLDIESGHRIIEIGCVELINRIPTGKVFHKYLNPERDIPYHSFKIHGISEEFLEDKPLFSDVVFEFLDFISGDILIIHNAEFDIKFLNMELGKLNARLISSDRVLDTLPLARKKFVGSPASLSALCKRFDISLENRELHGALTDAGLLAKVYVELTGGLQTFLFDNECKQDHNSAFIQHKVRNLTCREHSPSNEEINEHRKLLGKIDNPLWKERIE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U5P_A_4(2GUI)
DPO3E_ECOLI
[Raw transfer]




TMP_A_4(1J54)
DPO3E_ECOLI
[Raw transfer]




TMP_A_4(1J54)
DPO3E_ECOLI
[Raw transfer]




TMP_A_4(1J54)
DPO3E_ECOLI
[Raw transfer]




TMP_C_11(2IDO)
DPO3E_ECOLI
[Raw transfer]




EDO_A_7(1J54)
DPO3E_ECOLI
[Raw transfer]




U5P_A_5(2GUI)
DPO3E_ECOLI
[Raw transfer]




U5P_A_5(2GUI)
DPO3E_ECOLI
[Raw transfer]




TMP_A_5(1J53)
DPO3E_ECOLI
[Raw transfer]




EDO_C_12(2IDO)
DPO3E_ECOLI
[Raw transfer]




3 PsiBlast_PDB 96.8349%-116 - C3 -2GUI 4.4 DPO3E_ECOLI
42 Fugue 96.5451%-119 - C3 -1J54 4.5 DPO3E_ECOLI
2 PsiBlast_PDB 96.4049%-119 - C3 -1J54 4.5 DPO3E_ECOLI
21 PsiBlast_CBE 96.3049%-115 - C3 -2IDO 4.5 DPO3E_ECOLI
1 PsiBlast_PDB 96.1549%-118 - C3 -1J53 2.5 DPO3E_ECOLI
22 HHSearch 95.9449%-118 - C3 -2GUI 2.6 DPO3E_ECOLI
46 Fugue 90.5448%-122 - C3 -1J54 4.5 DPO3E_ECOLI
4 PsiBlast_PDB 71.1835%-123 - C3 -2P1J - DPO3_THEMA -
23 HHSearch 67.9033%-113 - C3 -2P1J - DPO3_THEMA -
27 HHSearch 66.8119%-108 - C3 -2F96 - RNT_PSEAE -
7 PsiBlast_PDB 64.4127%-106 - C3 -4FZX - EXOX_ECOLI -
24 HHSearch 63.3818% -96 - C3 -1W0H - ERI1_HUMAN -
48 Fugue 62.9615% -84 - C3 -1ZBH - ERI1_HUMAN -
5 PsiBlast_PDB 62.8627%-104 - C3 -4FZY - EXOX_ECOLI -
6 PsiBlast_PDB 62.4827%-106 - C3 -4FZZ - EXOX_ECOLI -
26 HHSearch 62.3319%-105 - C3 -3V9W - RNT_ECOLI -
30 HHSearch 56.7320% -81 - C3 -3MXM - TREX1_MOUSE -
25 HHSearch 56.6217% -83 * C3 *1ZBU - ERI1_HUMAN -
40 HHSearch 56.2615%-103 - C3 -1UOC - POP2_YEAST -
37 HHSearch 55.6215%-102 - C3 -2QXF - EX1_ECOLI -