@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0561: (2015-12-02 )
MNNYDLIVIGGGPSGYKCAIAAAKLGLKVACIDKNSIFGGTCLRVGCIPSKALLHSSYQYVYTKNNLPKLGIKTKDVNFNLKEMLGYKDARVQELGKGIDYLFNLYKITKINGLGKITSFDQDSLKVSVEDKVLKTKNIVIATGSNVSSLPGINIDEKNIISSTGALSLTEVPKKLVVIGAGAIGLEISSVWSRLGSEVIVVEFLDRIAATMDGELSKSLLSSLQKQGIKFMLSTKVEKIKQNSNSLSVKVSSIKDNQTNTIETDKVLIAVGRKPCTEDLGIDEKIEEDNRGFIQVNNRYETNVKGIFAIGDVIGGAMLAHKAEEEGVAVAEIIAGQSPHVDYEIIPSVIYTHPAVSSIGKIEEELKSAGRKYKVGKCQFAANGRAKITDDAEGFVKVLTCSTTDTILGVHIIGAYADTLINEAAVAMAYGAAAEDIYRICHSHPDINEAFRDACIDAFFKK

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_4(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_B_6(2EQ7)
?
[Raw transfer]



FAD_A_3(3URH)
?
[Raw transfer]



FAD_A_3(3URH)
?
[Raw transfer]



FAD_A_4(2EQ7)
?
[Raw transfer]



FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_A_7(2YQU)
?
[Raw transfer]



FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_A_7(2YQU)
?
[Raw transfer]



FAD_B_8(2YQU)
?
[Raw transfer]



FAD_D_4(1JEH)
DLDH_YEAST
[Raw transfer]



FAD_B_4(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_B_4(2EQ6)
?
[Raw transfer]



FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]



FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_B_5(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]



FAD_A_3(3II4)
DLDH_MYCTU
[Raw transfer]



FAD_B_4(1LPF)
DLDH_PSEFL
[Raw transfer]



FAD_C_3(1OJT)
?
[Raw transfer]



FAD_A_3(2A8X)
DLDH_MYCTU
[Raw transfer]



FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_B_5(1V59)
DLDH_YEAST
[Raw transfer]



FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_A_3(1LPF)
DLDH_PSEFL
[Raw transfer]



FAD_A_3(2EQ6)
?
[Raw transfer]



FAD_A_3(2EQ6)
?
[Raw transfer]



FAD_C_3(1LVL)
DLDH1_PSEPU
[Raw transfer]



FAD_C_3(1LVL)
DLDH1_PSEPU
[Raw transfer]



FAD_B_11(4JDR)
DLDH_ECOLI
[Raw transfer]



FAD_A_3(4JDR)
DLDH_ECOLI
[Raw transfer]



FAD_C_3(1BHY)
?
[Raw transfer]



FAD_C_3(1OJT)
?
[Raw transfer]
103 HHSearch 94.9350%-109 - C3 -3URH 12.8 ?
7 PsiBlast_PDB 94.5748%-112 - C3 -3URH 12.8 ?
104 HHSearch 94.0950%-103 * C3 *1ZMD - DLDH_HUMAN -
59 PsiBlast_CBE 94.0347%-109 - C3 -2QAE 12.4 DLDH_TRYCR
10 PsiBlast_PDB 93.7547%-109 - C3 -2QAE 12.5 DLDH_TRYCR
105 HHSearch 93.3648%-102 - C3 -1V59 13.1 DLDH_YEAST
102 HHSearch 92.7548%-106 - C3 -2QAE 12.5 DLDH_TRYCR
9 PsiBlast_PDB 92.1747%-102 - C3 -1V59 13.1 DLDH_YEAST
54 PsiBlast_CBE 92.1549%-103 - C3 -1ZY8 - DLDH_HUMAN -
46 PsiBlast_CBE 92.0049%-100 - C3 -1ZMC - DLDH_HUMAN -
31 PsiBlast_CBE 91.6749%-101 - C3 -2F5Z - DLDH_HUMAN -
43 PsiBlast_CBE 91.6349% -98 - C3 -1ZMC - DLDH_HUMAN -
39 PsiBlast_CBE 91.4249%-101 - C3 -1ZMD - DLDH_HUMAN -
36 PsiBlast_CBE 91.4249% -99 - C3 -1ZMD - DLDH_HUMAN -
33 PsiBlast_CBE 91.3149% -99 - C3 -1ZMD - DLDH_HUMAN -
45 PsiBlast_CBE 91.2949% -99 - C3 -1ZMC - DLDH_HUMAN -
21 PsiBlast_CBE 91.2651%-103 - C3 -1DXL - DLDH_PEA -
24 PsiBlast_CBE 91.2349% -98 - C3 -2F5Z - DLDH_HUMAN -
8 PsiBlast_PDB 90.9747%-103 - C3 -1JEH - DLDH_YEAST -
2 PsiBlast_PDB 90.8349% -98 - C3 -1ZMC - DLDH_HUMAN -
58 PsiBlast_CBE 90.2347%-100 - C3 -1JEH 12.7 DLDH_YEAST
57 PsiBlast_CBE 89.7347%-103 - C3 -1V59 12.9 DLDH_YEAST
61 PsiBlast_CBE 89.7144%-104 - C3 -2EQ7 13.3 ?
14 PsiBlast_PDB 89.4342%-109 - C3 -3LAD 11.9 DLDH_AZOVI
13 PsiBlast_PDB 89.2744%-103 - C3 -1LPF 12.3 DLDH_PSEFL
12 PsiBlast_PDB 89.0844%-107 - C3 -2YQU 12.8 ?
60 PsiBlast_CBE 88.6144%-105 - C3 -2YQU 13.2 ?
62 PsiBlast_CBE 88.4444%-104 - C3 -1LPF 12.5 DLDH_PSEFL
63 PsiBlast_CBE 88.3742%-107 - C3 -3LAD 12.2 DLDH_AZOVI
112 HHSearch 87.7544%-102 - C3 -2YQU 12.8 ?
74 PsiBlast_CBE 87.2740%-104 - C3 -2EQ6 12.8 ?
11 PsiBlast_PDB 87.2344%-104 - C3 -2EQ7 13.0 ?
110 HHSearch 85.7741%-103 - C3 -2EQ6 12.8 ?
15 PsiBlast_PDB 85.4740%-103 - C3 -2EQ6 12.8 ?
109 HHSearch 85.0842%-101 - C3 -3LAD 11.9 DLDH_AZOVI
75 PsiBlast_CBE 84.7136%-108 - C3 -1EBD 12.1 DLDH1_GEOSE
18 PsiBlast_PDB 83.3436%-105 - C3 -1EBD 12.6 DLDH1_GEOSE
116 HHSearch 81.2236%-100 - C3 -1EBD 12.1 DLDH1_GEOSE
101 HHSearch 80.8334%-100 - C3 -1LVL 11.5 DLDH1_PSEPU
19 PsiBlast_PDB 80.2835%-104 - C3 -4JDR 12.6 DLDH_ECOLI
81 PsiBlast_CBE 80.1835%-104 - C3 -4JDR 12.7 DLDH_ECOLI
82 PsiBlast_CBE 79.4234%-100 - C3 -1LVL 11.8 DLDH1_PSEPU
114 HHSearch 79.3433% -99 - C3 -2A8X 11.0 DLDH_MYCTU
106 HHSearch 79.1936% -98 - C3 -1OJT 10.8 ?
88 PsiBlast_CBE 77.3234% -96 - C3 -3II4 11.0 DLDH_MYCTU
89 PsiBlast_CBE 72.9035% -97 - C3 -1OJT 9.4 ?
90 PsiBlast_CBE 72.0035% -93 - C3 -1BHY 9.0 ?