@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0583: (2015-12-02 )
MDLSKITIASDAVNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

POP_A_14(2AU6)
IPYR_ECOLI
[Raw transfer]




POP_A_11(2AUU)
IPYR_ECOLI
[Raw transfer]




POP_A_13(2AU9)
IPYR_ECOLI
[Raw transfer]




PPV_B_15(3Q9M)
?
[Raw transfer]




PPV_A_7(3Q9M)
?
[Raw transfer]




POP_A_10(1I6T)
IPYR_ECOLI
[Raw transfer]




POP_A_5(3EIY)
?
[Raw transfer]




POP_A_7(2BQY)
IPYR_HELPY
[Raw transfer]




EDO_B_5(4ECP)
IPYR_MYCLE
[Raw transfer]




EDO_A_3(4ECP)
IPYR_MYCLE
[Raw transfer]




119 HHSearch 94.6160%-111 - C9 -3LD3 - ? -
1 PsiBlast_PDB 92.8261%-115 - C9 -3LD3 - ? -
21 PsiBlast_CBE 91.9561%-120 - C9 -3LD3 - ? -
127 HHSearch 91.4651%-120 - C9 -3D53 - IPYR_RICPR -
40 PsiBlast_CBE 91.1349%-121 - C9 -3FQ3 - ? -
41 PsiBlast_CBE 91.0949%-120 - C9 -3FQ3 - ? -
23 PsiBlast_CBE 90.7153%-118 - C9 -3EMJ - IPYR_RICPR -
47 PsiBlast_CBE 90.4649%-119 - C9 -3FQ3 - ? -
46 PsiBlast_CBE 90.4549%-117 - C9 -3FQ3 - ? -
25 PsiBlast_CBE 90.4553%-120 - C9 -3D53 - IPYR_RICPR -
55 PsiBlast_CBE 90.3646%-117 - C9 -3SW5 - ? -
125 HHSearch 90.2253%-113 - C9 -3TR4 - ? -
2 PsiBlast_PDB 90.0854%-136 - C9 -3LO0 - ? -
51 PsiBlast_CBE 90.0446%-116 - C9 -3SW5 - ? -
120 HHSearch 90.0349%-117 - C9 -3FQ3 - ? -
49 PsiBlast_CBE 90.0149%-119 - C9 -3FQ3 - ? -
4 PsiBlast_PDB 89.7653%-113 - C9 -3EMJ - IPYR_RICPR -
52 PsiBlast_CBE 89.7346%-118 - C9 -3SW5 - ? -
122 HHSearch 89.7148%-109 - C9 -3GVF - ? -
22 PsiBlast_CBE 89.5453%-114 - C9 -3EMJ - IPYR_RICPR -
15 PsiBlast_PDB 86.4856%-101 - C9 -1I6T 3.3 IPYR_ECOLI
67 PsiBlast_CBE 86.0851%-116 - C9 -3EIY 3.4 ?
20 PsiBlast_PDB 84.9056% -97 - C9 -2AUU 2.9 IPYR_ECOLI
19 PsiBlast_PDB 84.7056% -99 - C9 -2AU9 3.0 IPYR_ECOLI
68 PsiBlast_CBE 84.4248%-103 - C9 -2BQY 4.0 IPYR_HELPY
17 PsiBlast_PDB 84.4256% -98 - C9 -2AU6 3.4 IPYR_ECOLI
115 PsiBlast_CBE 81.8243%-108 - C9 -3Q9M 3.6 ?
105 PsiBlast_CBE 81.3546% -93 - C9 -4ECP 3.3 IPYR_MYCLE
116 PsiBlast_CBE 80.6943%-104 - C9 -3Q9M 2.9 ?
106 PsiBlast_CBE 80.6346% -90 - C9 -4ECP 3.1 IPYR_MYCLE