Study : Wbm0630 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C3_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C3_S1
Complex: ZED_A_6(2EWB) / Model_11(2EWB/A) = [3.3] Download1198.4315.73MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQDKQIINSIKKFSHFNGGFGEFFSVTLSDGKNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFGLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD
Complex: PLU_A_9(1LCP) / Model_12(1LCP/A) = [3.3] Download775.3918.28MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQDKQIINSIKKFSHFNGGFGEFFSVTLSDGKNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFGLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD
Complex: CHAIN_I_2(1BLL) / Model_7(1BLL/E) = [3.7] Download--MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQDKQIINSIKKFSHFNGGFGEFFSVTLSDGKNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFGLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD
Complex: CHAIN_D_2(2J9A) / Model_10(2J9A/A) = [5.0] Download--MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQDKQIINSIKKFSHFNGGFGEFFSVTLSDGKNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFGLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD
Consensus
[pKd Mean = 3.83]
-986
(s=211)
17
(s=1)
MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQDKQIINSIKKFSHFNGGFGEFFSVTLSDGKNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFGLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD