@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0684: (2015-12-03 )
MMNIPNIENCDLHGKAVLLRVDFNIPIKNGKVHDATRVLRSLPTIRHLVNAGAKVIIISHFGRPRAKDNNLSLKNVVKTLSQLLNKEVKFVDDCIGKKVQKVVNAIAIRDVILLENLRFYKEEEQNDANFAKQLASLADVYVNDAFSCSHRAHASISRITEFLPSYAGFCLQDELRYLEKAVSFEAKPITAIVGGAKISTKIKMLIRLAEKVDYLVLGGAIANNFLLFNKVNIGKSFFQNGVDSLLHDVVKIADKNNCKIVIPEDVLIAVNSDYSTCILRKTESVLDNDVILDIGPQTLSTISSIVASSKALLWNGPIGVFEHSAFANGTIEVMKVVSDSTHKGKLTSVIGGGDSLSAINAAGLTDKDFTYVSTGGGAFLSWLSGDKMPGIAALQSMLN

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]




ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]




ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




ADP_C_9(4NG4)
PGK_COXBU
[Raw transfer]




ADP_B_7(4NG4)
PGK_COXBU
[Raw transfer]




ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]




LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(4NG4)
PGK_COXBU
[Raw transfer]




LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]




LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]




ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]




ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]




ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]




CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]




AMP_A_7(1LTK)
PGK_PLAF7
[Raw transfer]




ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]




3PG_A_5(3ZOZ)
PGK1_HUMAN
[Raw transfer]




3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]




3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]




ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]




TZN_A_2(4O33)
PGK1_HUMAN
[Raw transfer]




TZN_A_2(4O3F)
PGK1_MOUSE
[Raw transfer]




3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]




2 PsiBlast_PDB 91.2341%-130 - C10 -1PHP 6.2 PGK_GEOSE
82 HHSearch 90.5841%-127 * C10 *1PHP 6.2 PGK_GEOSE
1 PsiBlast_PDB 90.5643%-119 - C10 -1VPE 8.3 PGKT_THEMA
25 PsiBlast_CBE 89.1238%-128 - C10 -4NG4 6.7 PGK_COXBU
84 HHSearch 88.9242%-117 - C10 -1VPE 8.3 PGKT_THEMA
26 PsiBlast_CBE 88.8238%-126 - C10 -4NG4 6.2 PGK_COXBU
13 PsiBlast_PDB 88.7738%-125 - C10 -2P9T 4.9 PGK2_MOUSE
17 PsiBlast_PDB 88.3138%-124 - C10 -1VJD 5.5 PGK1_PIG
49 PsiBlast_CBE 88.1837%-127 - C10 -2ZGV 5.0 PGK1_HUMAN
55 PsiBlast_CBE 88.1337%-126 - C10 -4O3F 5.0 PGK1_MOUSE
27 PsiBlast_CBE 88.0636%-122 - C10 -1V6S - PGK_THET8 -
10 PsiBlast_PDB 87.9436%-128 - C10 -1V6S - PGK_THET8 -
38 PsiBlast_CBE 87.9237%-123 - C10 -2XE8 4.3 PGK1_HUMAN
45 PsiBlast_CBE 87.7437%-125 - C10 -3C3A 4.7 PGK1_HUMAN
89 HHSearch 87.5632%-123 - C10 -2CUN 2.4 PGK_PYRHO
9 PsiBlast_PDB 87.3738%-124 - C10 -4NG4 5.5 PGK_COXBU
51 PsiBlast_CBE 87.3137%-123 - C10 -1KF0 5.0 PGK1_PIG
41 PsiBlast_CBE 87.2437%-128 - C10 -3C3C 4.7 PGK1_HUMAN
16 PsiBlast_PDB 87.1138%-123 - C10 -1VJC 5.2 PGK1_PIG
31 PsiBlast_CBE 87.0137%-121 - C10 -2X15 5.9 PGK1_HUMAN
83 HHSearch 87.0037%-122 - C10 -3Q3V 3.1 PGK_CAMJE
43 PsiBlast_CBE 86.9937%-127 - C10 -3C3B 3.2 PGK1_HUMAN
40 PsiBlast_CBE 86.9837%-124 - C10 -2XE6 5.7 PGK1_HUMAN
14 PsiBlast_PDB 86.9338%-122 - C10 -2PAA 5.7 PGK2_MOUSE
48 PsiBlast_CBE 86.8037%-128 - C10 -3C39 5.2 PGK1_HUMAN
86 HHSearch 86.7638%-118 - C10 -2WZB 8.1 PGK1_HUMAN
36 PsiBlast_CBE 86.7537%-121 - C10 -3ZOZ 6.5 PGK1_HUMAN
42 PsiBlast_CBE 86.7237%-125 - C10 -3C3C 4.5 PGK1_HUMAN
46 PsiBlast_CBE 86.5337%-125 - C10 -3C3A 3.8 PGK1_HUMAN
34 PsiBlast_CBE 86.5337%-121 - C10 -2WZB 8.1 PGK1_HUMAN
32 PsiBlast_CBE 86.5037%-121 - C10 -2X13 6.9 PGK1_HUMAN
28 PsiBlast_CBE 86.5038%-128 - C10 -2PAA 3.7 PGK2_MOUSE
37 PsiBlast_CBE 86.3737%-120 - C10 -2YBE 6.9 PGK1_HUMAN
33 PsiBlast_CBE 86.2437%-121 - C10 -2WZC 6.5 PGK1_HUMAN
50 PsiBlast_CBE 86.1237%-120 - C10 -4O33 5.7 PGK1_HUMAN
35 PsiBlast_CBE 86.0937%-121 - C10 -4AXX 5.9 PGK1_HUMAN
47 PsiBlast_CBE 86.0037%-125 - C10 -3C39 5.3 PGK1_HUMAN
30 PsiBlast_CBE 85.8837%-117 - C10 -2Y3I 6.2 PGK1_HUMAN
53 PsiBlast_CBE 85.7237%-120 - C10 -2WZD 7.1 PGK1_HUMAN
54 PsiBlast_CBE 85.6237%-120 - C10 -2X14 8.2 PGK1_HUMAN
56 PsiBlast_CBE 85.5536%-118 - C10 -1HDI 5.4 PGK1_PIG
39 PsiBlast_CBE 85.4237%-118 - C10 -2XE7 6.8 PGK1_HUMAN
29 PsiBlast_CBE 84.9737%-118 - C10 -2Y3I 6.4 PGK1_HUMAN
58 PsiBlast_CBE 84.8733%-111 - C10 -2CUN 2.4 PGK_PYRHO
6 PsiBlast_PDB 84.8340%-118 - C10 -1LTK 5.0 PGK_PLAF7
18 PsiBlast_PDB 84.4737%-122 - C10 -1QPG 7.5 PGK_YEAST
90 HHSearch 84.0838%-120 - C10 -1QPG 7.5 PGK_YEAST
57 PsiBlast_CBE 84.0833%-108 - C10 -2CUN 2.8 PGK_PYRHO
4 PsiBlast_PDB 83.3937%-124 - C10 -4FEY 4.1 PGK_FRATT
92 HHSearch 71.6840%-107 - C10 -1FW8 2.9 PGK_YEAST
19 PsiBlast_PDB 43.4137% -7 - C10 -3PGK 2.0 PGK_YEAST
93 HHSearch 41.1234%-109 - C10 -1FW8 3.0 PGK_YEAST