@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0685: (2015-12-03 )
METDIVVIGAGPVGIFTAFQAGMLDMRCHIIDVLDQAGGQCTALYPEKPIYDIPGYPVITAQKLIEQLMEQASPFEPVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNRPPLSGILEYENKSVFYNVNKISDFQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGSWDIQLERSRVVVDQATLRTSRDRIYAIGDVAAYLGKLKLILNGFAESTMACYDIYKVIHNSPVNFQYSTSKVVRGKKSDLL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_4(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_A_3(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_A_3(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_A_2(3LZW)
FENR2_BACSU
[Raw transfer]




FAD_A_3(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_B_6(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_A_4(2ZBW)
FENR_THET8
[Raw transfer]




25 HHSearch 90.8440%-130 - C1 -2ZBW 11.1 FENR_THET8
23 HHSearch 88.4338%-132 - C1 -3AB1 12.2 FENR_CHLTE
2 PsiBlast_PDB 87.2937%-128 - C1 -3AB1 12.0 FENR_CHLTE
21 PsiBlast_CBE 87.2637%-123 - C1 -3AB1 11.7 FENR_CHLTE
24 HHSearch 83.9735%-133 - C1 -3LZW 11.9 FENR2_BACSU
22 PsiBlast_CBE 82.5636%-140 - C1 -3LZX 11.4 FENR2_BACSU
1 PsiBlast_PDB 81.7841%-125 - C1 -2ZBW - FENR_THET8 -
3 PsiBlast_PDB 79.9336%-135 - C1 -3LZW - FENR2_BACSU -
4 PsiBlast_PDB 78.5236%-136 - C1 -3LZX 11.4 FENR2_BACSU
32 HHSearch 75.3024%-129 - C1 -3R9U - ? -
42 HHSearch 69.0624%-130 - C1 -2Q0L - TRXB_HELPY -
46 Fugue 66.4419%-115 - C1 -1HYU - AHPF_SALTY -
29 HHSearch 63.6022%-130 - C1 -3F8D - ? -
33 HHSearch 62.8319%-113 - C1 -1HYU - AHPF_SALTY -
17 PsiBlast_PDB 62.7722%-124 - C1 -3F8D - ? -
7 PsiBlast_PDB 62.7726%-120 - C1 -3ISH - TRXB_HELPY -
5 PsiBlast_PDB 62.6826%-124 - C1 -2Q0K - TRXB_HELPY -
6 PsiBlast_PDB 61.6526%-120 - C1 -2Q0L - TRXB_HELPY -
18 PsiBlast_PDB 61.4922%-125 - C1 -3F8P - ? -
19 PsiBlast_PDB 61.2222%-128 - C1 -3F8R - ? -