@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0753: (2015-12-04 )
MLSNLWKKGTDFLGSEFAIMGGAMSWVSERNLVSAISNAGGFGVIACGAMSSDLLEKEIIETQKLTNKPFGVNLITMHPNLSELIDVCIETKVSHIVLAGGLPVKPNIEKIKNVGIEVMCFAPSLSLAKRLVKMGVDALIIEGMEAGGHIGPVSTSVLSQEILPYFKDERVPVFVAGGIGRGEMIVNYLEMGASGCQIGTLFVCTNESIAHKNFKEVFIKSAARDAISSVQISADFPVIPVRAIANKASDDFMQYQKEIIDKYHKGQISKEDGQLEIEKFWAGALRGAVIEGDIETGSLMAGQSVGMVDKEKPVKEVIDILIQQASNYIESKSVKVGDLIISKASS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_7(2Z6J)
?
[Raw transfer]




FMN_A_9(2Z6I)
?
[Raw transfer]




FMN_B_9(2Z6J)
?
[Raw transfer]




FMN_A_9(2Z6I)
?
[Raw transfer]




TUI_B_10(2Z6J)
?
[Raw transfer]




TUI_A_8(2Z6J)
?
[Raw transfer]




1 PsiBlast_PDB 93.0138%-116 * C2 *2Z6J 8.0 ?
21 PsiBlast_CBE 91.9838%-114 - C2 -2Z6J 7.5 ?
57 HHSearch 91.4137%-101 - C2 -2Z6I 9.8 ?
58 HHSearch 91.1637%-109 - C2 -3BO9 - ? -
3 PsiBlast_PDB 90.9537%-110 - C2 -2Z6I 9.7 ?
4 PsiBlast_PDB 88.9532%-113 - C2 -4IQL - ? -
22 PsiBlast_CBE 87.6732%-112 - C2 -4IQL - ? -
2 PsiBlast_PDB 86.9935%-107 - C2 -3BO9 - ? -
5 PsiBlast_PDB 85.8428%-104 - C2 -2GJL - 2NPD_PSEAE -
6 PsiBlast_PDB 85.7528%-102 - C2 -2GJN - 2NPD_PSEAE -
59 HHSearch 84.5827%-106 - C2 -2GJL - 2NPD_PSEAE -
80 Fugue 83.3125% -98 - C2 -2GJL - 2NPD_PSEAE -
9 PsiBlast_PDB 74.7027%-126 - C2 -4QIT - ? -
7 PsiBlast_PDB 73.7927%-124 - C2 -4Q4K - ? -
10 PsiBlast_PDB 73.5127%-126 - C2 -4QIU - ? -
8 PsiBlast_PDB 73.3627%-129 - C2 -4QIS - ? -
74 HHSearch 62.4115%-142 - C2 -3SGZ - HAOX2_RAT -
62 HHSearch 61.2422%-123 - C2 -1EEP - IMDH_BORBU -
63 HHSearch 58.8822%-125 - C2 -3FFS - IMDH_CRYPV -
89 Fugue 57.9818%-108 - C2 -4QCC - DGOA_ECOLI -