@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0755: (2015-12-04 )
MFSNLYRGLLKTSSRFSDGVKSIFSAKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLASIKFDKEVEHNIITQQLMSEIEAILNPVVQPLILDKNPHIIMVCGVNGNGKTTTIGKLAYKYKNMGKSVMLVACDTFRAAASEQLNIWAERSDCFIVTGEYGNDSASVAYRAVSQAIKGSVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEAFSKMVSVTGLIITKLDGTAKGGVVIGLAETYRVKLHAIGIGESIEDLREFTSKEFAKALFGCD

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_6(2J7P)
FTSY_THEAQ
[Raw transfer]




GCP_D_17(1OKK)
FTSY_THEAQ
[Raw transfer]




GDP_B_11(4C7O)
FTSY_ECOLI
[Raw transfer]




GNP_K_11(2Q9C)
FTSY_THEAQ
[Raw transfer]




GOL_B_14(3DMD)
?
[Raw transfer]




GCP_A_3(1OKK)
FTSY_THEAQ
[Raw transfer]




GOL_C_16(3DMD)
?
[Raw transfer]




GNP_B_20(2J7P)
FTSY_THEAQ
[Raw transfer]




GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]




GOL_A_15(3DMD)
?
[Raw transfer]




GDP_C_14(4C7O)
FTSY_ECOLI
[Raw transfer]




GNP_A_12(2J7P)
FTSY_THEAQ
[Raw transfer]




CIT_B_4(1VMA)
?
[Raw transfer]




GNP_T_20(2Q9B)
FTSY_THEAQ
[Raw transfer]




GDP_A_8(4C7O)
FTSY_ECOLI
[Raw transfer]




GDP_C_2(3E70)
?
[Raw transfer]




GDP_D_2(2IYL)
FTSY_THEAQ
[Raw transfer]




GDP_D_18(4C7O)
FTSY_ECOLI
[Raw transfer]




147 HHSearch 95.1747%-128 - C6 -2YHS - FTSY_ECOLI -
151 HHSearch 91.8047%-124 - C6 -1VMA - ? -
146 HHSearch 89.8740%-126 - C6 -3B9Q - CFTSY_ARATH -
1 PsiBlast_PDB 89.6647%-111 - C6 -2QY9 - FTSY_ECOLI -
2 PsiBlast_PDB 89.6346%-113 - C6 -2YHS - FTSY_ECOLI -
23 PsiBlast_CBE 88.8645%-110 - C6 -1VMA 3.9 ?
145 HHSearch 88.7939%-124 - C6 -2OG2 - CFTSY_ARATH -
10 PsiBlast_PDB 88.7045%-112 - C6 -1VMA - ? -
22 PsiBlast_CBE 88.6648%-126 - C6 -4C7O 3.2 FTSY_ECOLI
4 PsiBlast_PDB 87.7447%-108 - C6 -1FTS - FTSY_ECOLI -
21 PsiBlast_CBE 87.7247%-114 - C6 -2XXA - FTSY_ECOLI -
6 PsiBlast_PDB 87.6948%-120 - C6 -4C7O 7.0 FTSY_ECOLI
5 PsiBlast_PDB 87.1147%-109 - C6 -3ZN8 - FTSY_ECOLI -
3 PsiBlast_PDB 87.0747%-114 - C6 -2XXA - FTSY_ECOLI -
9 PsiBlast_PDB 85.9742%-142 - C6 -3B9Q - CFTSY_ARATH -
7 PsiBlast_PDB 85.8942%-138 - C6 -2OG2 - CFTSY_ARATH -
8 PsiBlast_PDB 84.7042%-135 - C6 -4AK9 - ? -
159 HHSearch 83.4240%-128 - C6 -1RJ9 - FTSY_THEAQ -
160 HHSearch 82.2936%-118 - C6 -1ZU4 - FTSY_MYCMS -
152 HHSearch 80.1939%-120 - C6 -3E70 - ? -
34 PsiBlast_CBE 78.4636%-114 - C6 -3DMD 3.1 ?
24 PsiBlast_CBE 78.3449%-123 - C6 -2J7P 2.9 FTSY_THEAQ
31 PsiBlast_CBE 78.3336%-120 - C6 -3E70 7.3 ?
14 PsiBlast_PDB 77.6449%-123 - C6 -2J7P 2.9 FTSY_THEAQ
17 PsiBlast_PDB 77.6049%-125 - C6 -1OKK 7.3 FTSY_THEAQ
33 PsiBlast_CBE 77.2536%-114 - C6 -3DMD 3.4 ?
32 PsiBlast_CBE 76.1836%-116 - C6 -3DMD 3.1 ?
16 PsiBlast_PDB 75.4249%-133 - C6 -2IYL 5.2 FTSY_THEAQ
28 PsiBlast_CBE 74.5449%-128 - C6 -2Q9C 4.6 FTSY_THEAQ
13 PsiBlast_PDB 74.0749%-124 - C6 -1RJ9 2.9 FTSY_THEAQ
20 PsiBlast_PDB 72.0949%-132 - C6 -2Q9B 4.3 FTSY_THEAQ