@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0806: (2015-12-04 )
MHASTGKGSKIKYSRVLFKISGEALMGSRPFGHDMELIDQLCKDISDIYKLGVQVCIVVGGGNIFRGASASLSGCERASSDYIGMLATIINALILQNFLEKNSVNSKVLSAIPMVTICEPYIRRKAIHHLEKGRVVIFAAGTGNPFFTTDTAAALRAVETNCDAILKGTQVNGVYSADPKKNEDAVMYDRLSYMDLLTRDLKVVDASAISLARENSIPIIVFSLKEEKIVNIVKGHGTYTIVSDCE

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_B_13(2BND)
PYRH_ECOLI
[Raw transfer]



UDP_A_7(2BND)
PYRH_ECOLI
[Raw transfer]



UTP_A_3(2BNF)
PYRH_ECOLI
[Raw transfer]



U5P_A_7(2BNE)
PYRH_ECOLI
[Raw transfer]



U5P_A_7(2BNE)
PYRH_ECOLI
[Raw transfer]



U5P_B_10(2BNE)
PYRH_ECOLI
[Raw transfer]



GOL_A_4(4A7W)
PYRH_HELPY
[Raw transfer]



GOL_B_6(4A7W)
PYRH_HELPY
[Raw transfer]



GOL_A_5(1YBD)
PYRH_NEIMB
[Raw transfer]



GOL_A_5(1YBD)
PYRH_NEIMB
[Raw transfer]
11 PsiBlast_PDB 96.5351%-151 - C1 -4A7W 3.2 PYRH_HELPY
23 PsiBlast_CBE 96.0249%-145 - C1 -3EK5 - PYRH_XANCP -
12 PsiBlast_PDB 96.0251%-149 - C1 -4A7X - PYRH_HELPY -
41 PsiBlast_CBE 95.7951%-156 - C1 -4A7W 2.6 PYRH_HELPY
22 PsiBlast_CBE 95.7649%-145 - C1 -3EK5 - PYRH_XANCP -
24 PsiBlast_CBE 95.2449%-148 - C1 -3EK5 - PYRH_XANCP -
88 HHSearch 95.2351%-146 * C1 *1YBD 2.9 PYRH_NEIMB
39 PsiBlast_CBE 94.8351%-150 - C1 -4A7X - PYRH_HELPY -
9 PsiBlast_PDB 94.6051%-150 - C1 -1YBD 2.9 PYRH_NEIMB
2 PsiBlast_PDB 94.5749%-145 - C1 -3EK6 - PYRH_XANCP -
38 PsiBlast_CBE 94.4251%-152 - C1 -4A7X - PYRH_HELPY -
25 PsiBlast_CBE 93.8449%-146 - C1 -3EK5 - PYRH_XANCP -
1 PsiBlast_PDB 93.5449%-149 - C1 -3EK5 - PYRH_XANCP -
40 PsiBlast_CBE 93.3251%-151 - C1 -4A7X - PYRH_HELPY -
37 PsiBlast_CBE 91.9551%-150 - C1 -4A7X - PYRH_HELPY -
21 PsiBlast_CBE 91.7649%-147 - C1 -3EK5 - PYRH_XANCP -
10 PsiBlast_PDB 91.0942%-148 - C1 -2BNF 7.8 PYRH_ECOLI
13 PsiBlast_PDB 90.5141%-152 - C1 -2JJX - ? -
43 PsiBlast_CBE 90.0941%-153 - C1 -2JJX - ? -
7 PsiBlast_PDB 89.9544%-149 - C1 -1Z9D - PYRH_STRP1 -
26 PsiBlast_CBE 89.6443%-148 - C1 -2BND 7.5 PYRH_ECOLI
3 PsiBlast_PDB 89.2543%-147 - C1 -2BND 7.7 PYRH_ECOLI
32 PsiBlast_CBE 88.8943%-145 - C1 -2BNE 5.9 PYRH_ECOLI
4 PsiBlast_PDB 87.8743%-149 - C1 -2BNE 5.8 PYRH_ECOLI
79 Fugue 87.7843%-149 - C1 -2BNE 5.8 PYRH_ECOLI