@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0007: (2016-03-11 )
MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEEQTYERNREAVDRLGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

APR_A_3(3RQ6)
NNRD_BACSU
[Raw transfer]




B6P_A_3(3RQH)
NNRD_BACSU
[Raw transfer]




APR_A_6(3RS8)
NNR_THEMA
[Raw transfer]




BA3_A_3(3RQQ)
NNRD_BACSU
[Raw transfer]




AMP_A_3(3RQ2)
NNRD_BACSU
[Raw transfer]




AMP_A_3(3RPZ)
NNRD_BACSU
[Raw transfer]




AMP_A_3(3RPZ)
NNRD_BACSU
[Raw transfer]




AMP_A_3(3RPH)
NNRD_BACSU
[Raw transfer]




EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]




EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]




1 PsiBlast_PDB 98.6345%-116 - C2 -2R3B 2.2 NNRD_ENTFA
2 PsiBlast_PDB 98.3545%-119 - C2 -2R3E - NNRD_ENTFA -
29 HHSearch 96.5445%-107 * C2 *2R3B 2.2 NNRD_ENTFA
3 PsiBlast_PDB 92.6243%-101 - C2 -3BGK - ? -
30 HHSearch 90.9344%-104 - C2 -3BGK - ? -
15 PsiBlast_PDB 81.5029%-101 - C2 -3RTG - NNR_THEMA -
11 PsiBlast_PDB 81.5029%-102 - C2 -3RTA - NNR_THEMA -
17 PsiBlast_PDB 80.9329%-101 - C2 -3RRB - NNR_THEMA -
20 PsiBlast_PDB 80.8629%-102 - C2 -3RRJ - NNR_THEMA -
14 PsiBlast_PDB 80.8629%-103 - C2 -3RTE - NNR_THEMA -
5 PsiBlast_PDB 80.8129%-103 - C2 -3RS9 - NNR_THEMA -
16 PsiBlast_PDB 80.6929%-102 - C2 -3RU3 - NNR_THEMA -
6 PsiBlast_PDB 80.6229%-102 - C2 -3RSF - NNR_THEMA -
8 PsiBlast_PDB 80.5829%-102 - C2 -3RSS - NNR_THEMA -
4 PsiBlast_PDB 80.5729%-101 - C2 -3RS8 7.2 NNR_THEMA
19 PsiBlast_PDB 80.5029%-102 - C2 -3RRF - NNR_THEMA -
12 PsiBlast_PDB 80.3729%-102 - C2 -3RTC - NNR_THEMA -
18 PsiBlast_PDB 80.2729%-104 - C2 -3RRE - NNR_THEMA -
10 PsiBlast_PDB 80.2629%-101 - C2 -3RT9 - NNR_THEMA -
32 HHSearch 80.1030% -85 - C2 -3RPZ 6.0 NNRD_BACSU
28 PsiBlast_CBE 74.8133% -91 - C2 -3RPH 6.3 NNRD_BACSU
27 PsiBlast_CBE 74.6933% -91 - C2 -3RPZ 6.0 NNRD_BACSU
25 PsiBlast_CBE 73.5133% -89 - C2 -3RQ6 7.3 NNRD_BACSU
23 PsiBlast_CBE 73.3833% -90 - C2 -3RQH 6.6 NNRD_BACSU
22 PsiBlast_CBE 73.3233% -90 - C2 -3RQQ 6.8 NNRD_BACSU
26 PsiBlast_CBE 72.9533% -90 - C2 -3RQ2 6.0 NNRD_BACSU