@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0023: (2016-03-11 )
MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAM_A_2(4FAK)
RLMH_STAAU
[Raw transfer]




1 PsiBlast_PDB 98.04100%-126 - C2 -4FAK 8.2 RLMH_STAAU
2 PsiBlast_PDB 96.6899%-120 - C2 -1VH0 - RLMH_STAAU -
23 HHSearch 71.5332%-107 - C2 -1O6D - RLMH_THEMA -
4 PsiBlast_PDB 71.3132%-108 - C2 -1O6D - RLMH_THEMA -
3 PsiBlast_PDB 51.5658% -26 - C2 -1TO0 - RLMH_BACSU -
27 HHSearch 46.5312%-140 * C2 *3KNU - TRMD_ANAPZ -
30 HHSearch 46.2116%-137 - C2 -3QUV - ? -
31 HHSearch 45.5619%-139 - C2 -3IEF - TRMD_BARHE -
21 HHSearch 45.0860% 0 - C2 -1TO0 - RLMH_BACSU -
5 PsiBlast_PDB 44.1630% 2 - C2 -1NS5 - RLMH_ECOLI -
28 HHSearch 42.1819%-119 - C2 -1OY5 - TRMD_AQUAE -
25 HHSearch 41.6125% -98 - C2 -2QMM - TRMY_ARCFU -
29 HHSearch 41.1821%-140 - C2 -3KY7 - TRMD_STAAR -
42 Fugue 41.0916% -70 - C2 -2O3A - TRM56_ARCFU -
24 HHSearch 40.9610% -95 - C2 -3OII - NEP1_YEAST -
37 HHSearch 40.9115%-114 - C2 -2HA8 - TARB1_HUMAN -
39 HHSearch 40.7121% -84 - C2 -3ILK - Y380_HAEIN -
48 Fugue 40.1117% -53 - C2 -2YY8 - TRM56_PYRHO -
32 HHSearch 36.3715%-113 - C2 -3O7B - NEP1_ARCFU -
36 HHSearch 35.5720% -88 - C2 -1K3R - ? -