@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0039: (2016-03-11 )
MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISLLIQAPLLSAHVQQDKYETNVSYKKLNQLAPYFKGFDGSFVLYNEREQAYSIYNEPESKQRYSPNSTYKIYLALMAFDQNLLSLNHTEQQWDKHQYPFKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNEEISGNENYWNESSLKISAIEQVNLLKNMKQHNMHFDNKAIEKVENSMTLKQKDTYKYVGKTGTGIVNHKEANGWFVGYVETKDNTYYFATHLKGEDNANGEKAQQISERILKEMELI

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CAZ_C_9(1XKZ)
BLAR_STAAU
[Raw transfer]




CAZ_D_10(1XKZ)

[Raw transfer]




CAZ_A_7(1XKZ)
BLAR_STAAU
[Raw transfer]




CAZ_A_7(1XKZ)
BLAR_STAAU
[Raw transfer]




BOU_A_3(3Q7Z)
?
[Raw transfer]




BOU_B_4(3Q7Z)
?
[Raw transfer]




KOL_A_3(3Q82)
BLAR_STAAU
[Raw transfer]




CAZ_B_8(1XKZ)
BLAR_STAAU
[Raw transfer]




GOL_A_6(2IWB)

[Raw transfer]




GOL_A_6(2IWB)

[Raw transfer]




POP_B_11(1XA1)
BLAR_STAAU
[Raw transfer]




IM2_B_5(3Q81)

[Raw transfer]




POP_C_9(1XA1)
BLAR_STAAU
[Raw transfer]




KOL_B_6(3Q82)

[Raw transfer]




IM2_A_3(3Q81)
BLAR_STAAU
[Raw transfer]




GOL_A_5(3Q7V)
?
[Raw transfer]




CIT_A_2(4K0W)
?
[Raw transfer]




1S6_B_10(4MLL)
BLO1_ECOLX
[Raw transfer]




1S6_C_12(4MLL)
BLO1_ECOLX
[Raw transfer]




1 PsiBlast_PDB 94.7499% -55 - C5 -2IWC - MECR_STAAN -
33 HHSearch 94.51100% -57 - C5 -2IWB 3.3
3 PsiBlast_PDB 94.4599% -57 - C5 -2IWD - MECR_STAAN -
2 PsiBlast_PDB 93.84100% -54 - C5 -2IWB 3.3
29 PsiBlast_CBE 80.3646% -51 - C5 -3UY6 - -
40 HHSearch 79.9842% -47 - C5 -1NRF - BLAR_BACLI -
22 PsiBlast_CBE 79.2546% -56 - C5 -3Q81 4.1
4 PsiBlast_PDB 79.0146% -52 - C5 -3Q7Z 4.0 ?
21 PsiBlast_CBE 78.9946% -55 - C5 -3Q82 3.0
23 PsiBlast_CBE 78.7346% -51 - C5 -3Q7Z 4.1 ?
6 PsiBlast_PDB 78.6446% -52 - C5 -3Q82 3.8 BLAR_STAAU
10 PsiBlast_PDB 78.3146% -51 - C5 -3UY6 - BLAR_STAAU -
27 PsiBlast_CBE 77.7546% -55 - C5 -1XA1 2.9 BLAR_STAAU
9 PsiBlast_PDB 77.7542% -39 - C5 -1NRF - BLAR_BACLI -
26 PsiBlast_CBE 77.6546% -50 - C5 -1XKZ 4.3 BLAR_STAAU
7 PsiBlast_PDB 77.4746% -51 - C5 -3Q7V 2.2 ?
25 PsiBlast_CBE 77.4046% -54 - C5 -1XKZ 5.2 BLAR_STAAU
5 PsiBlast_PDB 77.3046% -50 - C5 -3Q81 4.0 BLAR_STAAU
28 PsiBlast_CBE 77.0446% -50 - C5 -1XA1 3.0 BLAR_STAAU
34 HHSearch 76.6845% -46 - C5 -1XKZ 3.0 BLAR_STAAU
8 PsiBlast_PDB 76.5946% -48 - C5 -1XKZ 3.0 BLAR_STAAU
24 PsiBlast_CBE 75.9046% -49 - C5 -1XKZ 5.2
31 PsiBlast_CBE 70.1833% -41 - C5 -4MLL 5.2 BLO1_ECOLX
32 PsiBlast_CBE 67.8133% -33 - C5 -4MLL 4.8 BLO1_ECOLX