@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0111: (2016-03-12 )
MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SE8_A_3(3MWF)
?
[Raw transfer]




SE8_A_3(3MWF)
?
[Raw transfer]




1 PsiBlast_PDB 100.00100% -63 - C1 -3MWF 6.0 ?
28 HHSearch 97.1098% -59 - C1 -3MWF 5.3 ?
3 PsiBlast_PDB 73.8740% -46 - C1 -3TNY - ? -
30 HHSearch 73.2239% -49 - C1 -3TNY - ? -
4 PsiBlast_PDB 68.3733% -46 - C1 -3EIW - ? -
2 PsiBlast_PDB 67.6399% 3 - C1 -3MWG - ? -
5 PsiBlast_PDB 67.5433% -46 - C1 -3LHS - ? -
21 PsiBlast_CBE 67.1433% -45 - C1 -3LI2 - ? -
7 PsiBlast_PDB 66.1733% -41 - C1 -3EIX - ? -
6 PsiBlast_PDB 65.7633% -45 - C1 -3LI2 - ? -
52 Fugue 64.6019% -37 - C1 -3R5T - ? -
33 HHSearch 62.3330% -33 * C1 *3LHS - ? -
32 HHSearch 60.2117% -32 - C1 -3R5T - ? -
29 HHSearch 59.1022% -25 - C1 -3TLK - FEPB_ECOLI -
44 HHSearch 59.0826% -30 - C1 -2WI8 - FEUA_BACSU -
34 HHSearch 58.7726% -31 - C1 -3GFV - YCLQ_BACSU -
9 PsiBlast_PDB 58.3428% -25 - C1 -3TEF - ? -
36 HHSearch 57.7420% -37 - C1 -2Q8P - ISDE_STAAN -
37 HHSearch 57.5219% -42 - C1 -2R7A - ? -
39 HHSearch 57.3919% -36 - C1 -3BE6 - ? -