@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0131: (2016-03-12 )
MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2FA_M_13(1PK9)
DEOD_ECO57
[Raw transfer]




ADN_Q_17(1PK7)
DEOD_ECO57
[Raw transfer]




2FA_O_15(1PK9)
DEOD_ECO57
[Raw transfer]




FMC_A_4(3UT6)
DEOD_ECOLI
[Raw transfer]




FMC_C_9(3UT6)
DEOD_ECOLI
[Raw transfer]




ADN_M_13(2AC7)
DEOD_BACAN
[Raw transfer]




2FA_B_4(4DAN)
DEOD_BACSU
[Raw transfer]




2FA_Q_17(1PK9)
DEOD_ECO57
[Raw transfer]




2FA_A_3(4DAN)
DEOD_BACSU
[Raw transfer]




ADN_A_2(3UAY)
DEOD_BACCE
[Raw transfer]




FMC_B_6(3UT6)
DEOD_ECOLI
[Raw transfer]




ADN_A_2(3UAW)
DEOD_BACCE
[Raw transfer]




ADN_A_2(3UAW)
DEOD_BACCE
[Raw transfer]




ADN_A_3(4D9H)
DEOD_BACSU
[Raw transfer]




ADN_M_13(1PK7)
DEOD_ECO57
[Raw transfer]




TBN_A_2(4DAR)
DEOD_BACSU
[Raw transfer]




NOS_A_2(3UAZ)
DEOD_BACCE
[Raw transfer]




2FD_G_7(1Z34)
?
[Raw transfer]




6CR_A_2(4DAE)
DEOD_BACSU
[Raw transfer]




2FD_Q_17(1PKE)
DEOD_ECO57
[Raw transfer]




2FD_M_13(1PKE)
DEOD_ECO57
[Raw transfer]




2FD_O_15(1PKE)
DEOD_ECO57
[Raw transfer]




GOL_A_9(4DAB)
DEOD_BACSU
[Raw transfer]




AC2_A_2(4DA7)
DEOD_BACSU
[Raw transfer]




GNG_A_2(4DA0)
DEOD_BACSU
[Raw transfer]




ADN_O_15(1PK7)
DEOD_ECO57
[Raw transfer]




BG2_A_2(4DA8)
DEOD_BACSU
[Raw transfer]




GA2_A_2(4DA6)
DEOD_BACSU
[Raw transfer]




ADE_B_8(4D8V)
DEOD_BACSU
[Raw transfer]




ADE_A_3(4DAO)
DEOD_BACSU
[Raw transfer]




ADE_B_4(4DAO)
DEOD_BACSU
[Raw transfer]




HPA_A_2(4DAB)
DEOD_BACSU
[Raw transfer]




ADE_A_5(4D8V)
DEOD_BACSU
[Raw transfer]




TRS_M_13(1JE0)
PNPH_SULSO
[Raw transfer]




122 HHSearch 93.4450%-116 - C2 -3U40 - ? -
47 PsiBlast_CBE 93.3751%-116 - C2 -3U40 - ? -
39 PsiBlast_CBE 92.9952%-109 - C2 -3OCC - DEOD_YERPY -
48 PsiBlast_CBE 92.5551%-117 - C2 -3U40 - ? -
63 PsiBlast_CBE 92.4251%-112 - C2 -4RJ2 - ? -
6 PsiBlast_PDB 92.4253%-112 - C2 -4M7W - ? -
45 PsiBlast_CBE 92.2951%-118 - C2 -3U40 - ? -
67 PsiBlast_CBE 92.1851%-114 - C2 -3UT6 4.2 DEOD_ECOLI
42 PsiBlast_CBE 91.9452%-110 - C2 -3OCC - DEOD_YERPY -
37 PsiBlast_CBE 91.7552%-110 - C2 -3OCC - DEOD_YERPY -
36 PsiBlast_CBE 91.4854%-122 - C2 -4D8V 3.2 DEOD_BACSU
101 PsiBlast_CBE 91.4251%-115 - C2 -1PK9 5.3 DEOD_ECO57
66 PsiBlast_CBE 91.2351%-113 - C2 -3UT6 4.3 DEOD_ECOLI
51 PsiBlast_CBE 91.2151%-118 - C2 -3TL6 - ? -
31 PsiBlast_CBE 91.0754%-121 - C2 -4D8Y - DEOD_BACSU -
56 PsiBlast_CBE 90.9751%-113 - C2 -4TS3 - ? -
20 PsiBlast_PDB 90.9554%-123 - C2 -4DAR 4.6 DEOD_BACSU
44 PsiBlast_CBE 90.8851%-120 - C2 -3U40 - ? -
35 PsiBlast_CBE 90.8654%-124 - C2 -4D8Y - DEOD_BACSU -
106 PsiBlast_CBE 90.8451%-113 - C2 -1K9S - DEOD_ECOLI -
98 PsiBlast_CBE 90.8051%-113 - C2 -1PKE 4.9 DEOD_ECO57
19 PsiBlast_PDB 90.7754%-125 - C2 -4DAO 3.2 DEOD_BACSU
16 PsiBlast_PDB 90.6554%-123 - C2 -4DAB 4.0 DEOD_BACSU
11 PsiBlast_PDB 90.5254%-125 - C2 -4D9H 4.9 DEOD_BACSU
4 PsiBlast_PDB 90.4655%-117 - C2 -3UAY 4.8 DEOD_BACCE
104 PsiBlast_CBE 90.2651%-113 - C2 -1PK7 4.7 DEOD_ECO57
14 PsiBlast_PDB 90.1654%-123 - C2 -4DA7 4.3 DEOD_BACSU
27 PsiBlast_CBE 90.1454%-122 - C2 -4DAO 3.2 DEOD_BACSU
28 PsiBlast_CBE 90.0854%-120 - C2 -4DAN 5.1 DEOD_BACSU
5 PsiBlast_PDB 90.0455%-116 - C2 -3UAZ 4.9 DEOD_BACCE
100 PsiBlast_CBE 90.0351%-113 - C2 -1PK9 5.3 DEOD_ECO57
7 PsiBlast_PDB 89.8354%-120 - C2 -4D8V 3.1 DEOD_BACSU
13 PsiBlast_PDB 89.4954%-122 - C2 -4DA6 4.8 DEOD_BACSU
68 PsiBlast_CBE 89.3451%-111 - C2 -3UT6 4.8 DEOD_ECOLI
17 PsiBlast_PDB 89.3454%-121 - C2 -4DAE 5.6 DEOD_BACSU
103 PsiBlast_CBE 89.3251%-111 - C2 -1PK7 4.5 DEOD_ECO57
15 PsiBlast_PDB 89.3054%-122 - C2 -4DA8 5.4 DEOD_BACSU
97 PsiBlast_CBE 89.0451%-112 - C2 -1PKE 4.5 DEOD_ECO57
102 PsiBlast_CBE 88.8451%-119 - C2 -1PK7 5.1 DEOD_ECO57
121 HHSearch 88.7052%-116 - C2 -3UAW 4.8 DEOD_BACCE
2 PsiBlast_PDB 88.6055%-112 - C2 -3UAW 4.8 DEOD_BACCE
18 PsiBlast_PDB 88.4954%-121 - C2 -4DAN 5.0 DEOD_BACSU
99 PsiBlast_CBE 88.2851%-110 - C2 -1PK9 5.5 DEOD_ECO57
12 PsiBlast_PDB 87.6754%-119 - C2 -4DA0 5.0 DEOD_BACSU
96 PsiBlast_CBE 87.5251%-115 - C2 -1PKE 5.0 DEOD_ECO57
21 PsiBlast_CBE 87.0055%-123 - C2 -2AC7 5.2 DEOD_BACAN
119 HHSearch 84.9343%-116 * C2 *1Z34 4.7 ?
127 HHSearch 74.4533%-115 - C2 -1JE0 3.5 PNPH_SULSO