@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0198: (2016-03-13 )
MSNLLEVNSLNVQFNYDETTVQAVKNVSFELRKKHILGIVGESGSGKSITAKSILGLLPDYPDHTLTGEIIFNGQSLNNLSTSALQQIRGKDISMIFQDPLSSLNPRLTIGKQITEVLFQHKRVSKSEAKSMTINILEKVGIKHATRQFDAYPHELSGGMRQRVMIAMALILKPQILIADEPTTALDASTQNQLLQLMKSLYEYTETSIIFITHDLGAVYQFCDDVIVMKDGSVVESGTVESIFKSPQHTYTKRLIDAIPDIHQTRPPRPLNNDILLKFDRVSVDYTSPSGSLYRAVNDINLAIRKGETLGIVGESGSGKSTLAKTVVGLKEVSEGFIWYNELPLSLFKDDELKSLRQEIQMIFQDPFASINPRFKVIDVIKRPLIIHGKVKDNDDIIKTVVSLLEKVGLDQSFLYRYPHELSGGQRQRVSIARALAVEPKVIVCDEAVSALDVSIQKDIIELLKQLQLDFGITYLFITHDMGVINEICDRVAVMKNGEIVELNNTEDIIKHPQSDYAKQLISEVAVIAK

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




24 PsiBlast_CBE 82.2440%-117 - C3 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 81.2840%-106 - C3 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 80.0840%-112 - C3 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 79.9340%-107 - C3 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 78.8640%-113 - C3 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 78.4640%-109 - C3 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 77.8140%-108 - C3 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 77.3740%-107 - C3 -3TUI - METN_ECOLI -
1 PsiBlast_PDB 75.5840%-106 - C3 -3DHW - METN_ECOLI -
73 HHSearch 73.3119% -90 - C- -2IW3 - EF3A_YEAST -
82 HHSearch 71.8428%-106 - C3 -1Z47 - ? -
28 PsiBlast_CBE 71.6037% -97 - C3 -4U02 - ? -
27 PsiBlast_CBE 71.1837% -95 - C3 -4U02 - ? -
93 HHSearch 71.0430%-110 - C3 -1OXX - ? -
6 PsiBlast_PDB 70.9237% -94 - C3 -4U02 - ? -
5 PsiBlast_PDB 70.6637% -92 - C3 -4U00 - ? -
29 PsiBlast_CBE 70.4337% -95 - C3 -4U02 - ? -
91 HHSearch 70.3233%-110 - C3 -2IT1 - ? -
78 HHSearch 69.3622% -85 - C2 -2R6F - ? -
74 HHSearch 69.3323% -89 - C2 -1YQT - ? -
56 PsiBlast_CBE 60.1133%-108 - C3 -1B0U 4.6 HISP_SALTY
70 PsiBlast_CBE 57.0532%-116 - C3 -4HLU 3.7 ECFA2_THEMA
69 PsiBlast_CBE 56.5532%-114 - C3 -4HLU 4.0 ECFA2_THEMA
41 PsiBlast_CBE 54.5233% -94 - C3 -4YMV 3.7 ?
68 PsiBlast_CBE 52.6932%-113 - C3 -4ZIR 3.7 ECFA2_THEMA
58 PsiBlast_CBE 50.4434% -99 - C3 -4S0F 4.1 ?
57 PsiBlast_CBE 49.8934% -95 - C3 -4S0F 2.5 ?
62 PsiBlast_CBE 43.0631% -85 - C3 -2FF7 4.9
61 PsiBlast_CBE 42.9331% -89 - C3 -2PMK 5.5