@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0219: (2016-03-13 )
MLKGHLHSVESLGTVDGPGLRYILFTQGCLLRCLYCHNPDTWKISEPSREVTVDEMVNEILPYKPYFDASGGGVTVSGGEPLLQMPFLEKLFAELKENGVHTCLDTSAGCANDTKAFQRHFEELQKHTDLILLDIKHIDNDKHIRLTGKPNTHILNFARKLSDMKQPVWIRHVLVPGYSDDKDDLIKLGEFINSLDNVEKFEILPYHQLGVHKWKTLGIAYELEDVEAPDDEAVKAAYRYVNFKGKIPVEL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SF4_A_2(3C8F)
PFLA_ECOLI
[Raw transfer]




36 Fugue 98.1745%-102 - C2 -3C8F 3.5 PFLA_ECOLI
1 PsiBlast_PDB 93.3947% -91 - C2 -3C8F - PFLA_ECOLI -
2 PsiBlast_PDB 90.2947% -84 - C2 -3CB8 - PFLA_ECOLI -
15 HHSearch 66.4819%-102 - C2 -2Z2U - TYW1_METJA -
38 Fugue 65.7719% -90 - C2 -2A5H - KAMA_CLOSU -
13 HHSearch 61.4422% -91 - C2 -1TV8 - MOAA_STAA8 -
14 HHSearch 60.9514% -81 - C2 -3RFA - RLMN_ECOLI -
20 HHSearch 60.9217% -80 - C2 -2YX0 - TYW1_PYRHO -
17 HHSearch 58.9319% -69 - C2 -2A5H - KAMA_CLOSU -
18 HHSearch 58.4415% -81 * C2 *3T7V - PYLB_METBF -
21 HHSearch 57.1417% -72 - C2 -1R30 - BIOB_ECOLI -
40 Fugue 53.9618% -54 - C2 -1TV8 - MOAA_STAA8 -
39 Fugue 53.6318% -54 - C2 -2YX0 - TYW1_PYRHO -
42 Fugue 52.2213% -60 - C2 -4JC0 - RIMO_THEMA -
23 HHSearch 50.7212% -64 - C2 -1OLT - HEMN_ECOLI -
22 HHSearch 50.5731% -12 - C2 -3CAN - ? -
26 HHSearch 47.489% -72 - C2 -3BLE - ? -
5 PsiBlast_PDB 44.0628% -76 - C2 -3ZPG - ? -
4 PsiBlast_PDB 44.0428% -77 - C2 -3ZPC - ? -
45 Fugue 43.5116% -29 - C2 -4NJH - ? -