@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0234: (2016-03-13 )
MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVDKNTTNALNVLDIMGRQDIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNWTPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADNHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIHDACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAVDLNHVTGKPANAYFATAVDVEEVWNLIDHKLRTYE

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DNB_A_7(3G5I)
RIHA_ECOLI
[Raw transfer]




PIR_A_9(2MAS)
IUNH_CRIFA
[Raw transfer]




NOS_B_10(3B9X)
RIHB_ECOLI
[Raw transfer]




PIR_B_10(2MAS)
IUNH_CRIFA
[Raw transfer]




PIR_A_9(2MAS)
IUNH_CRIFA
[Raw transfer]




PIR_C_11(2MAS)
IUNH_CRIFA
[Raw transfer]




DNB_C_10(3MKN)
?
[Raw transfer]




PIR_A_9(2MAS)
IUNH_CRIFA
[Raw transfer]




PIR_D_12(2MAS)
IUNH_CRIFA
[Raw transfer]




NOS_A_9(3B9X)
RIHB_ECOLI
[Raw transfer]




DNB_D_13(3G5I)
RIHA_ECOLI
[Raw transfer]




DNB_C_11(3G5I)
RIHA_ECOLI
[Raw transfer]




DNB_A_6(3MKN)
?
[Raw transfer]




RIB_A_2(1YOE)
RIHA_ECOLI
[Raw transfer]




DNB_D_12(3MKN)
?
[Raw transfer]




NOS_D_12(3B9X)
RIHB_ECOLI
[Raw transfer]




NOS_C_11(3B9X)
RIHB_ECOLI
[Raw transfer]




GOL_A_9(1Q8F)
RIHB_ECOLI
[Raw transfer]




GOL_D_12(1Q8F)
RIHB_ECOLI
[Raw transfer]




GOL_A_9(1Q8F)
RIHB_ECOLI
[Raw transfer]




GOL_D_16(1Q8F)
RIHB_ECOLI
[Raw transfer]




GOL_B_14(1Q8F)
RIHB_ECOLI
[Raw transfer]




GOL_B_13(3T8I)
?
[Raw transfer]




GOL_A_6(3T8I)
?
[Raw transfer]




GOL_C_15(1Q8F)
RIHB_ECOLI
[Raw transfer]




GOL_C_23(3T8I)
?
[Raw transfer]




21 PsiBlast_CBE 97.9645%-119 - C4 -3G5I 4.3 RIHA_ECOLI
2 PsiBlast_PDB 97.3845%-119 - C4 -3G5I 5.1 RIHA_ECOLI
1 PsiBlast_PDB 96.6945%-119 - C4 -1YOE 3.1 RIHA_ECOLI
22 PsiBlast_CBE 96.4245%-123 - C4 -3G5I 3.9 RIHA_ECOLI
6 PsiBlast_PDB 94.8340%-113 - C4 -1Q8F 3.0 RIHB_ECOLI
31 PsiBlast_CBE 94.6340%-111 - C4 -1Q8F 2.9 RIHB_ECOLI
25 PsiBlast_CBE 94.3740%-113 - C4 -3MKM - ? -
74 HHSearch 94.2540%-108 - C4 -1Q8F 3.0 RIHB_ECOLI
32 PsiBlast_CBE 94.2540%-114 - C4 -1Q8F 2.6 RIHB_ECOLI
5 PsiBlast_PDB 94.1140%-112 - C4 -3B9X 5.0 RIHB_ECOLI
3 PsiBlast_PDB 93.8640%-114 - C4 -3MKM - ? -
33 PsiBlast_CBE 93.5440%-111 - C4 -1Q8F 2.4 RIHB_ECOLI
84 Fugue 93.3937%-108 - C4 -2MAS 4.8 IUNH_CRIFA
28 PsiBlast_CBE 93.1540%-118 * C4 *3B9X 4.6 RIHB_ECOLI
73 HHSearch 93.0538%-108 - C4 -2MAS 4.8 IUNH_CRIFA
36 PsiBlast_CBE 92.5337%-111 - C4 -2MAS 4.7 IUNH_CRIFA
8 PsiBlast_PDB 92.3737%-110 - C4 -2MAS 4.8 IUNH_CRIFA
34 PsiBlast_CBE 92.1637%-111 - C4 -2MAS 4.6 IUNH_CRIFA
30 PsiBlast_CBE 92.1640%-116 - C4 -3B9X 4.6 RIHB_ECOLI
4 PsiBlast_PDB 91.9640%-121 - C4 -3MKN 4.9 ?
35 PsiBlast_CBE 91.9437%-110 - C4 -2MAS 4.7 IUNH_CRIFA
23 PsiBlast_CBE 91.7740%-117 - C4 -3MKN 4.9 ?
24 PsiBlast_CBE 88.7440%-123 - C4 -3MKN 4.3 ?
29 PsiBlast_CBE 88.2940%-117 - C4 -3B9X 3.6 RIHB_ECOLI
51 PsiBlast_CBE 71.7333% -89 - C4 -3T8I 2.9 ?
50 PsiBlast_CBE 71.3733% -89 - C4 -3T8I 2.5 ?
12 PsiBlast_PDB 71.3433% -88 - C4 -3T8I 2.9 ?