@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0258: (2016-03-13 )
MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKAAHIDTSYIIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVNQV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_6(1GQT)
RBSK_ECOLI
[Raw transfer]



ADP_B_9(4XDA)
?
[Raw transfer]



ADP_B_9(4XCK)
?
[Raw transfer]



GOL_A_2(3RY7)
?
[Raw transfer]



GOL_A_2(3RY7)
?
[Raw transfer]



RIB_A_5(4XCK)
?
[Raw transfer]



RIB_C_3(1RKS)
RBSK_ECOLI
[Raw transfer]



RIB_D_15(1GQT)
RBSK_ECOLI
[Raw transfer]



ACP_B_9(1GQT)
RBSK_ECOLI
[Raw transfer]



RIB_A_5(4XDA)
?
[Raw transfer]



ACP_C_12(1GQT)
RBSK_ECOLI
[Raw transfer]



ATP_A_5(3IKH)
?
[Raw transfer]



ADP_C_12(4XCK)
?
[Raw transfer]



ADP_A_17(1RK2)
RBSK_ECOLI
[Raw transfer]



ADP_D_14(4XCK)
?
[Raw transfer]



ADP_D_15(4XDA)
?
[Raw transfer]



ADP_C_19(1RK2)
RBSK_ECOLI
[Raw transfer]



ADP_B_18(1RK2)
RBSK_ECOLI
[Raw transfer]



ADP_I_9(1RKD)
RBSK_ECOLI
[Raw transfer]



ADP_I_9(1RKD)
RBSK_ECOLI
[Raw transfer]



ADP_C_12(4XDA)
?
[Raw transfer]



ADP_D_20(1RK2)
RBSK_ECOLI
[Raw transfer]



EDO_A_12(2RBC)
?
[Raw transfer]
45 HHSearch 96.3798% -99 - C1 -3RY7 2.7 ?
1 PsiBlast_PDB 95.9399% -95 - C1 -3RY7 2.7 ?
21 PsiBlast_CBE 77.5343% -83 - C1 -4XDA 6.1 ?
25 PsiBlast_CBE 76.9443% -85 - C1 -4XCK 5.9 ?
23 PsiBlast_CBE 76.8443% -84 - C1 -4XDA 5.6 ?
4 PsiBlast_PDB 76.4243% -83 - C1 -4XDA 3.6 ?
24 PsiBlast_CBE 76.2843% -82 - C1 -4XCK 5.4 ?
26 PsiBlast_CBE 76.1043% -83 - C1 -4XCK 4.8 ?
3 PsiBlast_PDB 75.8043% -83 - C1 -4XCK 3.4 ?
22 PsiBlast_CBE 75.3543% -81 - C1 -4XDA 5.8 ?
6 PsiBlast_PDB 74.7240% -83 - C1 -1RKA - RBSK_ECOLI -
2 PsiBlast_PDB 74.5843% -80 - C1 -4X8F - ? -
27 PsiBlast_CBE 74.2340% -81 - C1 -1RK2 5.9 RBSK_ECOLI
8 PsiBlast_PDB 74.1640% -82 - C1 -1GQT 5.8 RBSK_ECOLI
46 HHSearch 73.9236% -78 * C1 *2FV7 - RBSK_HUMAN -
5 PsiBlast_PDB 73.8440% -80 - C1 -1RK2 6.1 RBSK_ECOLI
30 PsiBlast_CBE 73.4040% -83 - C1 -1GQT 3.7 RBSK_ECOLI
29 PsiBlast_CBE 73.2440% -80 - C1 -1RK2 6.4 RBSK_ECOLI
28 PsiBlast_CBE 73.2340% -81 - C1 -1RK2 6.3 RBSK_ECOLI
32 PsiBlast_CBE 73.2040% -79 - C1 -1GQT 6.0 RBSK_ECOLI
31 PsiBlast_CBE 73.0940% -81 - C1 -1GQT 4.3 RBSK_ECOLI
9 PsiBlast_PDB 73.0240% -82 - C1 -1RKD 5.6 RBSK_ECOLI
7 PsiBlast_PDB 72.7740% -83 - C1 -1RKS 3.7 RBSK_ECOLI
44 HHSearch 72.4640% -77 - C1 -1RKD 5.6 RBSK_ECOLI