@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0259: (2016-03-13 )
MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGETTPYSNIALESNVTF

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIP_B_6(3P13)
RBSD_STAA8
[Raw transfer]




RIP_D_8(3P13)
RBSD_STAA8
[Raw transfer]




RIP_C_7(3P13)
RBSD_STAA8
[Raw transfer]




RP5_E_12(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_A_5(3P13)
RBSD_STAA8
[Raw transfer]




GOL_D_8(3P12)
RBSD_STAA8
[Raw transfer]




RIP_D_10(1OGD)
RBSD_BACSU
[Raw transfer]




GOL_B_6(3P12)
RBSD_STAA8
[Raw transfer]




RIP_C_9(1OGD)
RBSD_BACSU
[Raw transfer]




RP5_D_11(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_E_12(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_B_8(1OGD)
RBSD_BACSU
[Raw transfer]




GOL_C_7(3P12)
RBSD_STAA8
[Raw transfer]




GOL_A_5(3P12)
RBSD_STAA8
[Raw transfer]




GOL_A_5(3P12)
RBSD_STAA8
[Raw transfer]




RP5_C_9(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_A_7(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_A_7(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_A_7(1OGD)
RBSD_BACSU
[Raw transfer]




RP5_B_8(1OGE)
RBSD_BACSU
[Raw transfer]




GOL_A_6(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_D_10(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_B_9(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_D_11(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_B_8(1OGF)
RBSD_BACSU
[Raw transfer]




21 PsiBlast_CBE 95.64100%-112 - C5 -3P12 2.7 RBSD_STAA8
18 PsiBlast_CBE 95.60100%-108 - C5 -3P13 3.3 RBSD_STAA8
20 PsiBlast_CBE 95.43100%-115 - C5 -3P12 2.3 RBSD_STAA8
2 PsiBlast_PDB 95.26100%-104 - C5 -3P13 3.3 RBSD_STAA8
16 PsiBlast_CBE 94.99100%-107 - C5 -3P13 3.4 RBSD_STAA8
51 HHSearch 94.98100%-115 - C5 -3P12 2.7 RBSD_STAA8
1 PsiBlast_PDB 94.98100%-115 - C5 -3P12 2.7 RBSD_STAA8
19 PsiBlast_CBE 94.95100%-115 - C5 -3P12 3.7 RBSD_STAA8
17 PsiBlast_CBE 94.41100%-104 - C5 -3P13 3.3 RBSD_STAA8
34 PsiBlast_CBE 81.0242% -90 - C5 -1OGC - RBSD_BACSU -
27 PsiBlast_CBE 80.8342% -91 - C5 -1OGE 2.6 RBSD_BACSU
31 PsiBlast_CBE 80.6842% -92 - C5 -1OGD 3.2 RBSD_BACSU
32 PsiBlast_CBE 80.4142% -91 - C5 -1OGD 3.2 RBSD_BACSU
4 PsiBlast_PDB 80.2242% -92 - C5 -1OGC - RBSD_BACSU -
50 HHSearch 80.0443% -89 - C5 -1OGD 3.2 RBSD_BACSU
28 PsiBlast_CBE 80.0242% -93 - C5 -1OGE 2.9 RBSD_BACSU
33 PsiBlast_CBE 79.9842% -94 - C5 -1OGD 3.3 RBSD_BACSU
24 PsiBlast_CBE 79.9542% -94 - C5 -1OGF 2.6 RBSD_BACSU
26 PsiBlast_CBE 79.7342% -92 - C5 -1OGE 2.8 RBSD_BACSU
6 PsiBlast_PDB 79.6942% -89 - C5 -1OGE - RBSD_BACSU -
5 PsiBlast_PDB 79.6542% -91 - C5 -1OGD 3.2 RBSD_BACSU
30 PsiBlast_CBE 79.5742% -92 - C5 -1OGD 3.1 RBSD_BACSU
7 PsiBlast_PDB 79.4942% -94 - C5 -1OGF 2.8 RBSD_BACSU
29 PsiBlast_CBE 79.4842% -91 - C5 -1OGE 2.5 RBSD_BACSU
23 PsiBlast_CBE 79.4842% -91 - C5 -1OGF 2.7 RBSD_BACSU
22 PsiBlast_CBE 79.3142% -94 - C5 -1OGF 4.0 RBSD_BACSU
25 PsiBlast_CBE 79.0042% -93 - C5 -1OGF 2.5 RBSD_BACSU
61 Fugue 78.6541% -83 - C5 -1OGD 3.2 RBSD_BACSU