@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0304: (2016-03-14 )
MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQKKQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIRDYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEKIVGVKYTAPNFFLLERIRKAFPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRDIDAGLPKRPFKPFNEAHRQTLDQLIAKYDL

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SI3_B_9(4IMF)
?
[Raw transfer]



NGF_B_9(4IMG)
?
[Raw transfer]



SI3_A_3(4IMF)
?
[Raw transfer]



HMN_D_8(1F73)
NANA_HAEIN
[Raw transfer]



NGF_A_3(4IMG)
?
[Raw transfer]



HMN_A_5(1F73)
NANA_HAEIN
[Raw transfer]



NAU_A_4(1F7B)
NANA_HAEIN
[Raw transfer]



HMN_C_7(1F73)
NANA_HAEIN
[Raw transfer]



HMN_B_6(1F73)
NANA_HAEIN
[Raw transfer]



NAY_A_4(1F74)
NANA_HAEIN
[Raw transfer]



NAY_C_5(1F74)
NANA_HAEIN
[Raw transfer]



NAV_C_5(1F7B)
NANA_HAEIN
[Raw transfer]



EDO_C_18(4IMC)
?
[Raw transfer]



3PY_C_9(3LCW)
NANA_ECOLI
[Raw transfer]



3PY_D_11(3LCW)
NANA_ECOLI
[Raw transfer]



3PY_B_6(1HL2)
NANA_ECOLI
[Raw transfer]



3PY_D_8(1HL2)
NANA_ECOLI
[Raw transfer]



3PY_A_5(1HL2)
NANA_ECOLI
[Raw transfer]



3PY_A_5(3LCW)
NANA_ECOLI
[Raw transfer]



3PY_C_7(1HL2)
NANA_ECOLI
[Raw transfer]



3PY_B_7(3LCW)
NANA_ECOLI
[Raw transfer]



3PY_D_8(1FDY)
NANA_ECOLI
[Raw transfer]



3PY_B_6(1FDY)
NANA_ECOLI
[Raw transfer]



3PY_C_7(1FDY)
NANA_ECOLI
[Raw transfer]



3PY_A_5(1FDY)
NANA_ECOLI
[Raw transfer]



EDO_A_7(4IMC)
?
[Raw transfer]



PYR_B_6(1FDZ)
NANA_ECOLI
[Raw transfer]



PYR_A_5(1FDZ)
NANA_ECOLI
[Raw transfer]



EDO_D_25(4IMC)
?
[Raw transfer]



EDO_A_8(4IMC)
?
[Raw transfer]



EDO_C_19(4IMC)
?
[Raw transfer]



PYR_D_8(1FDZ)
NANA_ECOLI
[Raw transfer]



EDO_B_14(4IMC)
?
[Raw transfer]



PYR_C_7(1FDZ)
NANA_ECOLI
[Raw transfer]
4 PsiBlast_PDB 99.1199%-101 - C5 -4AHQ - NANA_STAA8 -
2 PsiBlast_PDB 97.7399%-105 - C5 -4AH7 - NANA_STAA8 -
3 PsiBlast_PDB 97.6299%-102 - C5 -4AMA - NANA_STAA8 -
23 PsiBlast_CBE 97.1699%-100 - C5 -4AHP - NANA_STAA8 -
22 PsiBlast_CBE 96.9799%-100 - C5 -4AHP - NANA_STAA8 -
21 PsiBlast_CBE 96.9199% -98 - C5 -4AHP - NANA_STAA8 -
1 PsiBlast_PDB 96.6199% -98 - C5 -4AHP - NANA_STAA8 -
30 PsiBlast_CBE 87.7855% -95 - C5 -4IMC 2.3 ?
31 PsiBlast_CBE 87.5955% -93 - C5 -4IMC 2.4 ?
32 PsiBlast_CBE 87.4555% -95 - C5 -4IMC 2.3 ?
39 PsiBlast_CBE 87.2955% -94 - C5 -4IME - ? -
13 PsiBlast_PDB 86.9655% -93 - C5 -4IMF 4.6 ?
11 PsiBlast_PDB 86.8255% -96 - C5 -4IMC 3.2 ?
40 PsiBlast_CBE 86.8155% -95 - C5 -4IME - ? -
38 PsiBlast_CBE 86.7655% -95 - C5 -4IME - ? -
37 PsiBlast_CBE 86.6855% -93 - C5 -4IME - ? -
33 PsiBlast_CBE 86.6255% -94 - C5 -4IMG 5.4 ?
35 PsiBlast_CBE 86.5955% -93 - C5 -4IME - ? -
41 PsiBlast_CBE 86.4055% -94 - C5 -4IME - ? -
14 PsiBlast_PDB 86.1555% -95 - C5 -4IMG 5.4 ?
34 PsiBlast_CBE 86.0855% -92 - C5 -4IMF 4.5 ?
8 PsiBlast_PDB 84.3154% -94 - C5 -1F7B 3.6 NANA_HAEIN
28 PsiBlast_CBE 83.5554% -91 - C5 -1F73 4.9 NANA_HAEIN
7 PsiBlast_PDB 83.4954% -92 - C5 -1F74 4.6 NANA_HAEIN
27 PsiBlast_CBE 82.8354% -91 - C5 -1F73 4.9 NANA_HAEIN
25 PsiBlast_CBE 82.8154% -91 - C5 -1F74 4.7 NANA_HAEIN
26 PsiBlast_CBE 82.7354% -89 - C5 -1F73 4.8 NANA_HAEIN
6 PsiBlast_PDB 82.4354% -89 - C5 -1F73 4.7 NANA_HAEIN
68 PsiBlast_CBE 82.2837% -98 - C5 -1FDY 2.6 NANA_ECOLI
24 PsiBlast_CBE 81.9254% -89 - C5 -1F7B 3.4 NANA_HAEIN
65 PsiBlast_CBE 81.6737% -95 - C5 -1FDZ 3.2 NANA_ECOLI
64 PsiBlast_CBE 81.6537% -98 - C5 -1FDZ 3.0 NANA_ECOLI
66 PsiBlast_CBE 81.5337% -96 - C5 -1FDZ 3.2 NANA_ECOLI
83 PsiBlast_CBE 81.4636% -96 - C5 -1HL2 3.4 NANA_ECOLI
80 PsiBlast_CBE 81.2936% -95 - C5 -1HL2 3.4 NANA_ECOLI
69 PsiBlast_CBE 81.2437% -97 - C5 -1FDY 3.0 NANA_ECOLI
81 PsiBlast_CBE 81.1236% -95 - C5 -1HL2 3.4 NANA_ECOLI
67 PsiBlast_CBE 80.8137% -96 - C5 -1FDZ 2.9 NANA_ECOLI
71 PsiBlast_CBE 80.7937% -96 - C5 -1FDY 2.7 NANA_ECOLI
82 PsiBlast_CBE 80.7836% -95 - C5 -1HL2 3.3 NANA_ECOLI
70 PsiBlast_CBE 80.2237% -94 - C5 -1FDY 2.9 NANA_ECOLI
95 PsiBlast_CBE 80.0337% -95 - C5 -3LCW 3.3 NANA_ECOLI
92 PsiBlast_CBE 78.8837% -96 - C5 -3LCW 3.0 NANA_ECOLI
94 PsiBlast_CBE 78.6437% -97 - C5 -3LCW 3.1 NANA_ECOLI
93 PsiBlast_CBE 78.3137% -96 - C5 -3LCW 3.4 NANA_ECOLI