@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0346: (2016-03-14 )
MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYDYARSGNPNRELLEEKLARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGTFRLTEQILNRFNIEFTTVDTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKIAEKHELLVAVDNTFMTPLGQSPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISEALYLIQNGTGNMLSAQDSWTLAKHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTTAHLEQAKNGGAVIGFRLADESKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEEVRQERGITFGLFRLSVGLEDPDELIADIKYALKEAFNESIPHTIER

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PLP_A_3(2CTZ)
?
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
23 PsiBlast_CBE 95.2647% -97 - C1 -4L0O - METB_HELPY -
1 PsiBlast_PDB 95.2147% -97 - C1 -4L0O - METB_HELPY -
26 PsiBlast_CBE 92.5047% -98 - C1 -4L0O - METB_HELPY -
38 PsiBlast_CBE 91.4839% -92 - C1 -1PG8 - MEGL_PSEPU -
28 PsiBlast_CBE 91.4741% -97 - C1 -1IBJ 3.3 METC_ARATH
119 HHSearch 91.4038% -88 - C1 -2RFV - ? -
37 PsiBlast_CBE 91.0739% -92 - C1 -1PG8 - MEGL_PSEPU -
21 PsiBlast_CBE 90.8747% -97 - C1 -4L0O - METB_HELPY -
25 PsiBlast_CBE 90.5247%-100 - C1 -4L0O - METB_HELPY -
39 PsiBlast_CBE 90.3539% -97 - C1 -1PG8 - MEGL_PSEPU -
5 PsiBlast_PDB 90.3241% -99 - C1 -4OMA 6.3 ?
6 PsiBlast_PDB 90.0641% -98 - C1 -4HF8 6.1 ?
22 PsiBlast_CBE 89.9847%-100 - C1 -4L0O - METB_HELPY -
24 PsiBlast_CBE 89.9747% -99 - C1 -4L0O - METB_HELPY -
27 PsiBlast_CBE 89.4447% -97 - C1 -4L0O - METB_HELPY -
18 PsiBlast_PDB 89.4239% -93 - C1 -1PG8 - MEGL_PSEPU -
10 PsiBlast_PDB 89.2441% -96 - C1 -3JWB 2.3 ?
43 PsiBlast_CBE 89.2238% -95 - C1 -1UKJ - MEGL_PSEPU -
51 PsiBlast_CBE 89.2138% -96 - C1 -3VK3 - MEGL_PSEPU -
8 PsiBlast_PDB 89.2041% -97 - C1 -3JW9 3.6 ?
2 PsiBlast_PDB 88.7241% -93 - C1 -1IBJ 3.9 METC_ARATH
9 PsiBlast_PDB 87.9841% -96 - C1 -3JWA 3.2 ?
16 PsiBlast_PDB 86.9338% -92 - C1 -1E5E 5.4 ?
17 PsiBlast_PDB 86.2838% -93 - C1 -1E5F 3.8 ?
36 PsiBlast_CBE 85.6738% -94 - C1 -1E5E 4.9 ?
35 PsiBlast_CBE 85.2138% -94 - C1 -1E5F 3.7 ?
113 HHSearch 84.2937% -84 - C1 -1E5E 5.2 ?
114 HHSearch 84.1239% -85 - C1 -1IBJ 4.0 METC_ARATH
84 PsiBlast_CBE 83.2440%-103 - C1 -1PFF 2.0 ?
121 HHSearch 77.5330% -80 - C1 -2CTZ 4.6 ?
125 HHSearch 76.9638% -98 * C1 *1PFF 2.0 ?