@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0375: (2016-03-14 )
MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHGRLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLVAGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSHDLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAJ_A_4(4QNE)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




NAD_B_8(4X3Z)
?
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_U_21(1JR1)
IMDH2_CRIGR
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_A_3(5AHM)
?
[Raw transfer]




IMP_A_5(4IX2)
?
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




IMP_A_17(1JR1)
IMDH2_CRIGR
[Raw transfer]




IMP_A_4(4AF0)
?
[Raw transfer]




IMP_B_6(4AF0)
?
[Raw transfer]




RVP_Y_25(1NF7)
IMDH2_HUMAN
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




CPR_B_13(1NFB)
IMDH2_HUMAN
[Raw transfer]




CPR_A_9(1NFB)
IMDH2_HUMAN
[Raw transfer]




MYD_U_21(1NF7)
IMDH2_HUMAN
[Raw transfer]




XMP_A_3(3TSD)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




Q21_A_6(4MY8)
?
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




Q21_B_13(4MY8)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




39H_A_6(4QM1)
?
[Raw transfer]




39H_C_9(4QM1)
?
[Raw transfer]




39H_B_8(4QM1)
?
[Raw transfer]




39H_C_10(4QM1)
?
[Raw transfer]




1 PsiBlast_PDB 88.9572% -83 - C2 -3TSB - ? -
106 HHSearch 86.3767% -94 - C- -1ZFJ - IMDH_STRPY -
105 HHSearch 86.0973% -95 - C2 -3USB 4.7 ?
3 PsiBlast_PDB 85.2670% -96 - C2 -3USB 4.7 ?
4 PsiBlast_PDB 84.7264% -85 * C1 *1ZFJ - IMDH_STRPY -
2 PsiBlast_PDB 84.5472% -92 - C2 -3TSD 6.0 ?
6 PsiBlast_PDB 81.3251% -86 - C2 -4FXS 6.7 ?
8 PsiBlast_PDB 76.1855% -91 - C2 -4DQW - ? -
21 PsiBlast_CBE 75.6655% -95 - C2 -4DQW - ? -
107 HHSearch 68.9160% -83 - C2 -1VRD - ? -
5 PsiBlast_PDB 68.7260% -83 - C2 -1VRD - ? -
110 HHSearch 67.3652% -76 - C2 -2CU0 6.7 IMDH_PYRHO
111 HHSearch 67.3450% -89 - C2 -1EEP - IMDH_BORBU -
11 PsiBlast_PDB 67.3351% -76 - C2 -2CU0 6.7 IMDH_PYRHO
7 PsiBlast_PDB 66.8455% -86 - C2 -4AVF - ? -
77 PsiBlast_CBE 66.6340% -81 - C2 -1NF7 4.6 IMDH2_HUMAN
10 PsiBlast_PDB 66.5855% -92 - C2 -5AHN 5.0 ?
76 PsiBlast_CBE 66.1940% -80 - C2 -1NF7 5.0 IMDH2_HUMAN
75 PsiBlast_CBE 65.6940% -83 - C2 -1NFB 5.1 IMDH2_HUMAN
74 PsiBlast_CBE 65.2940% -82 - C2 -1NFB 5.2 IMDH2_HUMAN
84 PsiBlast_CBE 64.7341% -80 - C2 -4AF0 6.7 ?
85 PsiBlast_CBE 64.6641% -79 - C2 -4AF0 6.8 ?
81 PsiBlast_CBE 64.3540% -77 - C2 -1JR1 6.1 IMDH2_CRIGR
108 HHSearch 63.6233% -77 - C2 -1ME8 6.6 IMDH_TRIFO
34 PsiBlast_CBE 62.9970% -88 - C2 -4MYA 5.6 ?
80 PsiBlast_CBE 62.8040% -80 - C2 -1JR1 6.1 IMDH2_CRIGR
26 PsiBlast_CBE 61.9370% -90 - C2 -4QM1 5.1 ?
15 PsiBlast_PDB 61.4770% -83 - C2 -4MYA 5.7 ?
13 PsiBlast_PDB 61.2470% -85 - C2 -4MY8 5.5 ?
43 PsiBlast_CBE 60.7170% -91 - C2 -4MY8 5.8 ?
44 PsiBlast_CBE 60.3370% -87 - C2 -4MY8 5.1 ?
18 PsiBlast_PDB 60.2370% -88 - C2 -4QM1 4.8 ?
24 PsiBlast_CBE 60.1070% -87 - C2 -4QM1 5.0 ?
73 PsiBlast_CBE 59.9360% -78 - C2 -4FO4 6.0 ?
25 PsiBlast_CBE 59.4970% -89 - C2 -4QM1 5.0 ?
72 PsiBlast_CBE 59.1060% -75 - C2 -4FO4 6.3 ?
63 PsiBlast_CBE 59.0360% -75 - C2 -4X3Z 5.7 ?
64 PsiBlast_CBE 58.0860% -74 - C2 -4X3Z 5.6 ?
66 PsiBlast_CBE 58.0260% -75 - C2 -4QNE 4.3 ?
67 PsiBlast_CBE 57.9560% -73 - C2 -4QNE 5.7 ?
82 PsiBlast_CBE 57.5262% -77 - C2 -5AHM 6.4 ?
71 PsiBlast_CBE 57.1860% -76 - C2 -4IX2 5.1 ?
68 PsiBlast_CBE 56.9960% -80 - C2 -4IX2 5.6 ?
69 PsiBlast_CBE 56.9160% -77 - C2 -4IX2 6.1 ?
70 PsiBlast_CBE 56.2060% -75 - C2 -4IX2 4.1 ?
65 PsiBlast_CBE 54.7760% -90 - C2 -4QQ3 6.9 ?