@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0388: (2016-03-15 )
MKFTAIAKAIFVLGILTTSVMITENQSVNAKGKYEKMNRLYDTNKLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENKYKEKTHGLDVFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGSADKGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_7(5D3D)
?
[Raw transfer]



SUGAR_A_2(2R61)
?
[Raw transfer]
-
SUGAR_C_13(4RFB)
?
[Raw transfer]
-
GOL_B_13(5D3D)
?
[Raw transfer]



SUGAR_A_2(4DXG)
?
[Raw transfer]
-
SUGAR_A_3(4RCO)
?
[Raw transfer]
-
SUGAR_B_5(4RCO)
?
[Raw transfer]
-
SUGAR_A_5(4RFB)
?
[Raw transfer]
-
SUGAR_D_17(4RFB)
?
[Raw transfer]
-
SUGAR_B_9(4RFB)
?
[Raw transfer]
-
63 HHSearch 92.1899% -75 - C6 -3R2T - ? -
1 PsiBlast_PDB 92.1899% -75 - C6 -3R2T - ? -
2 PsiBlast_PDB 81.0467% -65 - C6 -3R2I - ? -
64 HHSearch 79.4365% -55 - C6 -3R2I - ? -
5 PsiBlast_PDB 75.5853% -60 - C6 -1V1O - ? -
6 PsiBlast_PDB 75.1253% -62 - C6 -1V1P - ? -
21 PsiBlast_CBE 75.0751% -52 - C6 -2QEJ - ? -
7 PsiBlast_PDB 75.0551% -57 - C6 -2QEJ - ? -
12 PsiBlast_PDB 74.5238% -76 - C6 -2RDH - ? -
67 HHSearch 73.6451% -56 - C6 -1V1P - ? -
82 Fugue 72.5137% -59 - C6 -1M4V - ? -
9 PsiBlast_PDB 72.1637% -60 - C6 -1M4V - ? -
13 PsiBlast_PDB 70.2341% -53 - C6 -4RFB 3.4 ?
8 PsiBlast_PDB 69.9137% -63 - C6 -2Z8L - ? -
33 PsiBlast_CBE 69.8841% -63 - C6 -4RCO 3.9 ?
65 HHSearch 69.7737% -64 - C6 -2Z8L - ? -
37 PsiBlast_CBE 69.5441% -62 - C6 -4DXF - ? -
16 PsiBlast_PDB 69.5441% -61 - C6 -4DXF - ? -
22 PsiBlast_CBE 69.3538% -71 - C6 -2RDH - ? -
26 PsiBlast_CBE 69.1141% -53 - C6 -4RFB 3.6 ?
10 PsiBlast_PDB 68.3437% -60 - C6 -2R61 2.9 ?
25 PsiBlast_CBE 68.0341% -52 - C6 -4RFB 3.4 ?
32 PsiBlast_CBE 67.9641% -68 - C6 -4RCO 4.2 ?
31 PsiBlast_CBE 67.4341% -66 - C6 -5D3D 2.9 ?
14 PsiBlast_PDB 66.3041% -64 - C6 -5D3D Error ?
17 PsiBlast_PDB 66.0241% -52 - C6 -4DXG 3.6 ?
27 PsiBlast_CBE 64.4741% -51 - C6 -4RFB 3.6 ?