@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0419: (2016-03-15 )
MNKKTKLIHGGHTTDDYTGAVTTPIYQTSTYLQDDIGDLRQGYEYSRTANPTRSSVESVIAALENGKHGFAFSSGVAAISAVVMLLDKGDHIILNSDVYGGTYRALTKVFTRFGIEVDFVDTTHTDSIVQAIRPTTKMLFIETPSNPLLRVTDIKKSAEIAKEHGLISVVDNTFMTPYYQNPLDLGIDIVLHSATKYLGGHSDVVAGLVATSDDKLAERLAFISNSTGGILGPQDSYLLVRGIKTLGLRMEQINRSVIEIIKMLQAHPAVQQVFHPSIESHLNHDVHMAQADGHTGVIAFEVKNTESAKQLIKATSYYTLAESLGAVESLISVPALMTHASIPADIRAKEGITDGLVRISVGIEDTEDLVDDLKQALDTL

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PZP_A_2(3MKJ)
?
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



PLP_A_3(2CTZ)
?
[Raw transfer]



PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
30 PsiBlast_CBE 91.0250% -99 - C1 -4IY7 - ? -
28 PsiBlast_CBE 90.9350% -98 - C1 -4IY7 - ? -
29 PsiBlast_CBE 90.5750%-100 - C1 -4IY7 - ? -
3 PsiBlast_PDB 89.7150% -98 - C1 -4IYO - ? -
1 PsiBlast_PDB 89.1454%-101 - C1 -4L0O - METB_HELPY -
2 PsiBlast_PDB 88.7650% -96 - C1 -4IY7 - ? -
26 PsiBlast_CBE 88.0254%-100 - C1 -4L0O - METB_HELPY -
23 PsiBlast_CBE 87.5154% -97 - C1 -4L0O - METB_HELPY -
25 PsiBlast_CBE 87.3254%-102 - C1 -4L0O - METB_HELPY -
21 PsiBlast_CBE 87.1854% -99 - C1 -4L0O - METB_HELPY -
24 PsiBlast_CBE 86.8354%-100 - C1 -4L0O - METB_HELPY -
36 PsiBlast_CBE 86.3745% -98 - C1 -3COG - CGL_HUMAN -
39 PsiBlast_CBE 85.8345%-100 - C1 -2NMP - CGL_HUMAN -
22 PsiBlast_CBE 85.8154%-102 - C1 -4L0O - METB_HELPY -
38 PsiBlast_CBE 85.3345% -99 - C1 -2NMP - CGL_HUMAN -
106 HHSearch 84.0742% -99 - C1 -2RFV - ? -
18 PsiBlast_PDB 83.7845%-103 - C1 -2NMP - CGL_HUMAN -
35 PsiBlast_CBE 83.7345% -97 - C1 -3COG - CGL_HUMAN -
15 PsiBlast_PDB 83.5441% -98 - C1 -2RFV - ? -
12 PsiBlast_PDB 83.2041% -98 - C1 -3JW9 3.4 ?
14 PsiBlast_PDB 82.4141% -97 - C1 -3JWB 1.9 ?
9 PsiBlast_PDB 82.0941% -99 - C1 -4OMA 6.2 ?
13 PsiBlast_PDB 81.8941% -97 - C1 -3JWA 2.2 ?
10 PsiBlast_PDB 80.7641% -97 - C1 -4HF8 6.0 ?
11 PsiBlast_PDB 79.0741%-101 - C1 -3MKJ 4.5 ?
42 PsiBlast_CBE 79.0041% -96 - C1 -1E5E 4.8 ?
105 HHSearch 78.0441% -93 - C1 -1E5E 5.5 ?
41 PsiBlast_CBE 78.0441% -94 - C1 -1E5F 3.7 ?
40 PsiBlast_CBE 78.0441% -93 - C1 -1E5F 3.6 ?
104 HHSearch 77.1742% -94 - C1 -1IBJ 3.9 METC_ARATH
20 PsiBlast_PDB 77.1141% -94 - C1 -1E5E 5.5 ?
7 PsiBlast_PDB 76.9443%-101 - C1 -1IBJ 3.9 METC_ARATH
97 PsiBlast_CBE 76.6341%-108 - C1 -1PFF 2.0 ?
31 PsiBlast_CBE 76.3643%-100 - C1 -1IBJ 3.4 METC_ARATH
115 HHSearch 74.1038%-107 - C1 -1PFF 2.0 ?
110 HHSearch 66.4432% -89 - C1 -2CTZ 4.5 ?