@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0433: (2016-03-15 )
MSKEIDWRKSVVYQIYPKSFNDTTGNGIGDINGIIEKLDYIKLLGVDYIWLTPVYESPMNDNGYDISNYLEINEAFGTMDDFEKLIKVAHQKDLKVMLDIVINHTSTEHEWFKEARKSKDNPYRDYYFFRSSEDGPPTNWHSKFGGNAWKYDSETDEYYLHLFDVSQADLNWDNPEVRQSLYRIVNHWIDFGVDGFRFDVINLISKGEFKDSDKIGKEFYTDGPRVHEFLHELNRQTFGNTDMMTVGEMSSTTIENCIKYTQPERQELNSVFNFHHLKVDYVDGEKWTNAKLDFHKLKEILMQWQRGIYDGGGWNAIFWCNHDQPRVVSRFGDDTSEEMRIQSAKMLAIALHMLQGTPYIYQGEEIGMTDPHFTSIAQYRDVESINAYHQLLSEGHAEADVLAILGQKSRDNSRTPMQWSDDVNAGFTAGKPWIDISENYHQVNVRQALQNKESIFYTYQKLIQLRHTHDIITYGDIVPRFMDHDHLFVYERHYKNQQWLVIANFSASAVDLPEGLAREGCVVIQTGTVENNTISGFGAIVIETNA

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_B_4(2PWE)
?
[Raw transfer]




SUC_A_4(4HPH)
?
[Raw transfer]




SUC_A_3(2PWE)
?
[Raw transfer]




TEU_A_4(4H8V)
?
[Raw transfer]




SUC_A_4(4H8U)
?
[Raw transfer]




TEU_B_6(4H8V)
?
[Raw transfer]




GLC_A_4(4H7V)
?
[Raw transfer]




ISL_A_4(4HA1)
?
[Raw transfer]




GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]




GLC_B_6(4H7V)
?
[Raw transfer]




TEU_B_6(4H8U)
?
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




NOJ_A_11(3GBE)
?
[Raw transfer]




NOJ_B_6(2PWD)
?
[Raw transfer]




NOJ_A_5(2PWD)
?
[Raw transfer]




BGC_A_6(3WY3)
?
[Raw transfer]




GLC_A_4(4HOZ)
?
[Raw transfer]




BGC_B_10(3WY3)
?
[Raw transfer]




SUGAR_A_2(2ZID)
DEXB_STRMU
[Raw transfer]

-

GLC_A_4(4HP5)
?
[Raw transfer]




CTS_B_6(2PWG)
?
[Raw transfer]




TRS_B_6(4GO8)
?
[Raw transfer]




CTS_A_5(2PWG)
?
[Raw transfer]




GLO_A_3(4M56)
O16G1_BACSU
[Raw transfer]




GOL_B_15(4GI8)
?
[Raw transfer]




GOL_A_5(4GIA)
?
[Raw transfer]




GOL_B_8(4GI9)
?
[Raw transfer]




GOL_A_5(4GI8)
?
[Raw transfer]




GOL_A_5(4GI6)
?
[Raw transfer]




GOL_B_10(4GI6)
?
[Raw transfer]




GLC_B_6(4HA1)
?
[Raw transfer]




GOL_B_12(4GIA)
?
[Raw transfer]




TRS_B_6(1ZJB)
?
[Raw transfer]




GOL_A_3(4GIN)
?
[Raw transfer]




BGC_A_2(4WLC)
?
[Raw transfer]




BGC_A_8(3WY2)
?
[Raw transfer]




TRS_A_5(1ZJB)
?
[Raw transfer]




TRS_A_4(4GO8)
?
[Raw transfer]




GOL_A_3(4HOW)
?
[Raw transfer]




BGC_A_8(3WY2)
?
[Raw transfer]




GOL_A_3(4MAZ)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




GOL_B_6(4H8H)
?
[Raw transfer]




TRS_B_6(1ZJA)
?
[Raw transfer]




GOL_B_11(3WY2)
?
[Raw transfer]




TRS_B_6(4GO9)
?
[Raw transfer]




TRS_A_2(4HOX)
?
[Raw transfer]




GOL_A_3(4M8U)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_A_4(4GO9)
?
[Raw transfer]




TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]




GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




GOL_A_7(4H2C)
?
[Raw transfer]




GOL_A_14(3UCQ)
?
[Raw transfer]




GLC_A_3(3AXH)
MALX3_YEAST
[Raw transfer]




EDO_A_4(3GBD)
?
[Raw transfer]




EDO_A_2(3GBD)
?
[Raw transfer]




TRS_A_4(4GI9)
?
[Raw transfer]




87 HHSearch 86.2351% -74 - C1 -1UOK - O16G_BACCE -
1 PsiBlast_PDB 86.0049% -77 - C1 -1UOK - O16G_BACCE -
3 PsiBlast_PDB 83.1445% -75 - C1 -4MB1 3.4 O16G1_BACSU
21 PsiBlast_CBE 82.5645% -73 - C1 -4M56 2.7 O16G1_BACSU
2 PsiBlast_PDB 82.3545% -74 - C1 -4M56 2.5 O16G1_BACSU
4 PsiBlast_PDB 81.9045% -74 - C1 -4M8U 3.1 O16G1_BACSU
5 PsiBlast_PDB 81.5645% -75 - C1 -4MAZ 4.4 O16G1_BACSU
7 PsiBlast_PDB 80.7442% -78 - C1 -4WLC 4.7 ?
9 PsiBlast_PDB 80.0842% -76 - C1 -2ZID 4.2 DEXB_STRMU
11 PsiBlast_PDB 79.0242% -73 - C1 -3GBE 3.4 ?
10 PsiBlast_PDB 78.5342% -75 - C1 -3GBD 3.0 ?
6 PsiBlast_PDB 78.3542% -77 - C1 -2ZIC 3.5 DEXB_STRMU
8 PsiBlast_PDB 78.1342% -77 - C1 -4XB3 - ? -
15 PsiBlast_PDB 77.3042% -72 - C1 -4HP5 4.8 ?
12 PsiBlast_PDB 77.2542% -72 - C1 -4HOW 3.1 ?
14 PsiBlast_PDB 77.0942% -70 - C1 -4HPH 4.2 ?
13 PsiBlast_PDB 75.9742% -71 - C1 -4HOX 2.3 ?
33 PsiBlast_CBE 75.7440% -76 - C1 -4GIN 2.9 ?
16 PsiBlast_PDB 75.5242% -72 - C1 -4HOZ 4.0 ?
46 PsiBlast_CBE 75.2840% -76 - C1 -4H2C 2.6 ?
27 PsiBlast_CBE 73.0840% -70 - C1 -4GO8 4.3 ?
57 PsiBlast_CBE 72.9840% -72 * C1 *4H7V 3.4 ?
32 PsiBlast_CBE 72.8740% -70 - C1 -2PWG 4.5 ?
25 PsiBlast_CBE 72.8740% -71 - C1 -1ZJB 4.3 ?
54 PsiBlast_CBE 72.7940% -73 - C1 -4HA1 3.0 ?
40 PsiBlast_CBE 72.7240% -71 - C1 -4GI9 2.9 ?
35 PsiBlast_CBE 72.6340% -71 - C1 -4GO9 4.4 ?
22 PsiBlast_CBE 72.6140% -70 - C1 -4H8V 2.9 ?
55 PsiBlast_CBE 72.6040% -73 - C1 -4H8U 3.7 ?
19 PsiBlast_PDB 72.5540% -71 - C1 -1ZJB 4.2 ?
41 PsiBlast_CBE 72.4840% -73 - C1 -4GI9 2.3 ?
89 HHSearch 72.2637% -67 - C1 -1ZJA 3.9 ?
38 PsiBlast_CBE 72.2140% -70 - C1 -4GIA 2.8 ?
56 PsiBlast_CBE 72.0840% -73 - C1 -4H8U 3.7 ?
31 PsiBlast_CBE 72.0840% -71 - C1 -2PWG 3.2 ?
28 PsiBlast_CBE 72.0240% -69 - C1 -4GO8 4.3 ?
26 PsiBlast_CBE 72.0240% -71 - C1 -1ZJA 4.4 ?
34 PsiBlast_CBE 71.9440% -71 - C1 -4GO9 3.0 ?
24 PsiBlast_CBE 71.8340% -69 - C1 -2PWD 4.0 ?
53 PsiBlast_CBE 71.7940% -73 - C1 -4HA1 4.2 ?
39 PsiBlast_CBE 71.6840% -72 - C1 -4GIA 3.0 ?
42 PsiBlast_CBE 71.6740% -70 - C1 -4GI8 2.9 ?
43 PsiBlast_CBE 71.6240% -70 - C1 -4GI8 4.2 ?
58 PsiBlast_CBE 71.4040% -70 - C1 -4H7V 4.8 ?
44 PsiBlast_CBE 71.3040% -70 - C1 -4GI6 2.7 ?
36 PsiBlast_CBE 71.3040% -70 - C1 -2PWE 3.8 ?
23 PsiBlast_CBE 71.2640% -70 - C1 -4H8V 4.4 ?
47 PsiBlast_CBE 71.2440% -69 - C1 -4H8H 1.9 ?
45 PsiBlast_CBE 71.0540% -70 - C1 -4GI6 3.9 ?
60 PsiBlast_CBE 71.0139% -69 - C1 -3A4A 4.0 MALX3_YEAST
18 PsiBlast_PDB 70.7140% -70 - C1 -1ZJA 3.9 ?
37 PsiBlast_CBE 70.5440% -68 - C1 -2PWE 4.0 ?
20 PsiBlast_PDB 70.3640% -68 - C1 -2PWD 4.0 ?
63 PsiBlast_CBE 70.2138% -70 - C1 -3AXH 3.0 MALX3_YEAST
62 PsiBlast_CBE 69.7638% -68 - C1 -3AXI 3.7 MALX3_YEAST
64 PsiBlast_CBE 66.6833% -72 - C1 -3WY2 3.2 ?
65 PsiBlast_CBE 65.2533% -72 - C1 -3WY2 3.7 ?
70 PsiBlast_CBE 64.9133% -73 - C1 -3WY3 4.0 ?
69 PsiBlast_CBE 63.7933% -72 - C1 -3WY3 3.9 ?
91 HHSearch 63.1833% -69 - C1 -3WY2 3.7 ?
75 PsiBlast_CBE 26.7132% -65 - C1 -3UCQ 2.7 ?