@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0440: (2016-03-15 )
MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

13Y_A_3(4HDC)
KTHY_STAAN
[Raw transfer]




13Y_B_4(4HDC)
KTHY_STAAN
[Raw transfer]




43N_A_3(4XWA)
KTHY_STAA1
[Raw transfer]




43N_B_4(4XWA)
KTHY_STAA1
[Raw transfer]




32K_B_4(4QG7)
KTHY_STAAR
[Raw transfer]




16T_B_4(4HLD)
KTHY_STAAR
[Raw transfer]




16T_A_3(4HLD)
KTHY_STAAR
[Raw transfer]




32C_B_4(4QGG)
KTHY_STAAR
[Raw transfer]




32E_A_3(4QGH)
KTHY_STAAR
[Raw transfer]




31Z_A_3(4QGA)
KTHY_STAAR
[Raw transfer]




31Z_B_4(4QGA)
KTHY_STAAR
[Raw transfer]




32E_B_4(4QGH)
KTHY_STAAR
[Raw transfer]




Z5A_A_2(5TMP)
KTHY_ECOLI
[Raw transfer]




32K_A_3(4QG7)
KTHY_STAAR
[Raw transfer]




32C_A_3(4QGG)
KTHY_STAAR
[Raw transfer]




32B_A_3(4QGF)
KTHY_STAAR
[Raw transfer]




T05_B_4(4HLC)
KTHY_STAAR
[Raw transfer]




T05_A_3(4HLC)
KTHY_STAAR
[Raw transfer]




T5A_A_2(4TMK)
KTHY_ECOLI
[Raw transfer]




T5A_A_2(4TMK)
KTHY_ECOLI
[Raw transfer]




0Y5_A_3(4GSY)
KTHY_STAAR
[Raw transfer]




ATM_A_5(4GMD)
KTHY_PSEAE
[Raw transfer]




0YB_A_3(4GFD)
KTHY_STAAM
[Raw transfer]




ATM_B_4(4EAQ)
KTHY_STAAM
[Raw transfer]




14D_A_3(4HEJ)
KTHY_STAAN
[Raw transfer]




TYD_B_7(3HJN)
KTHY_THEMA
[Raw transfer]




TYD_A_4(3HJN)
KTHY_THEMA
[Raw transfer]




ATM_A_3(4EAQ)
KTHY_STAAM
[Raw transfer]




ATM_D_15(4GMD)
KTHY_PSEAE
[Raw transfer]




THM_B_6(3N2I)
KTHY_VIBCH
[Raw transfer]




TYD_A_4(3HJN)
KTHY_THEMA
[Raw transfer]




ATM_C_12(4GMD)
KTHY_PSEAE
[Raw transfer]




THM_A_4(3N2I)
KTHY_VIBCH
[Raw transfer]




ATM_B_8(4GMD)
KTHY_PSEAE
[Raw transfer]




TMP_B_8(4EDH)
KTHY_PSEAE
[Raw transfer]




TMP_A_3(4EDH)
KTHY_PSEAE
[Raw transfer]




0DJ_B_4(3UWO)
KTHY_PSEAE
[Raw transfer]




0DJ_A_3(3UWO)
KTHY_PSEAE
[Raw transfer]




0DF_B_5(3UWK)
KTHY_PSEAE
[Raw transfer]




0DF_A_3(3UWK)
KTHY_PSEAE
[Raw transfer]




THM_A_2(4ESH)
KTHY_PSEAE
[Raw transfer]




MES_A_3(4MQB)
KTHY_STAAM
[Raw transfer]




0DN_A_7(3UXM)
KTHY_PSEAE
[Raw transfer]




0DN_C_11(3UXM)
KTHY_PSEAE
[Raw transfer]




MRD_B_7(3V9P)
KTHY_BURTA
[Raw transfer]




MRD_A_3(3V9P)
KTHY_BURTA
[Raw transfer]




MRD_A_3(3V9P)
KTHY_BURTA
[Raw transfer]




0DN_D_12(3UXM)
KTHY_PSEAE
[Raw transfer]




0DN_B_8(3UXM)
KTHY_PSEAE
[Raw transfer]




EDO_B_7(3LD9)
KTHY_EHRCR
[Raw transfer]




EDO_D_10(3LD9)
KTHY_EHRCR
[Raw transfer]




ADP_A_2(3LV8)
KTHY_VIBCH
[Raw transfer]




ADP_A_2(3LV8)
KTHY_VIBCH
[Raw transfer]




1 PsiBlast_PDB 97.87100%-103 - C2 -4DWJ - KTHY_STAAM -
18 PsiBlast_PDB 97.2398%-106 - C2 -4MQB 2.3 KTHY_STAAM
25 PsiBlast_CBE 96.83100%-106 - C2 -4DWJ - KTHY_STAAM -
5 PsiBlast_PDB 96.12100%-118 - C- -2CCJ - KTHY_STAAM -
24 PsiBlast_CBE 95.94100%-100 - C2 -4DWJ - KTHY_STAAM -
30 PsiBlast_CBE 95.93100%-103 - C2 -4QGH 9.6 KTHY_STAAR
29 PsiBlast_CBE 95.60100%-104 - C2 -4XWA 10.6 KTHY_STAA1
26 PsiBlast_CBE 95.47100%-102 - C2 -4DWJ - KTHY_STAAM -
36 PsiBlast_CBE 95.35100%-100 - C2 -4HDC 10.1 KTHY_STAAN
32 PsiBlast_CBE 95.32100%-102 - C2 -4QGA 8.9 KTHY_STAAR
27 PsiBlast_CBE 95.20100%-102 - C2 -4DWJ - KTHY_STAAM -
31 PsiBlast_CBE 95.08100%-106 - C2 -4QGG 10.0 KTHY_STAAR
33 PsiBlast_CBE 95.03100%-101 - C2 -4QG7 8.9 KTHY_STAAR
34 PsiBlast_CBE 94.87100%-103 - C2 -4HLD 8.8 KTHY_STAAR
9 PsiBlast_PDB 94.80100%-109 - C2 -4HEJ 8.4 KTHY_STAAN
21 PsiBlast_CBE 94.32100%-103 - C2 -4EAQ 6.8 KTHY_STAAM
16 PsiBlast_PDB 93.93100%-102 - C2 -4QGH 9.9 KTHY_STAAR
35 PsiBlast_CBE 93.86100%-104 - C2 -4HLC 8.8 KTHY_STAAR
17 PsiBlast_PDB 93.60100%-101 - C2 -4XWA 10.3 KTHY_STAA1
28 PsiBlast_CBE 93.59100%-110 - C- -2CCG - KTHY_STAAM -
14 PsiBlast_PDB 93.14100%-101 - C2 -4QGF 9.5 KTHY_STAAR
11 PsiBlast_PDB 92.81100%-100 - C2 -4HLD 9.1 KTHY_STAAR
15 PsiBlast_PDB 92.67100%-102 - C2 -4QGG 10.3 KTHY_STAAR
13 PsiBlast_PDB 92.63100% -99 - C2 -4QGA 9.5 KTHY_STAAR
2 PsiBlast_PDB 92.15100%-101 - C2 -4EAQ 6.3 KTHY_STAAM
12 PsiBlast_PDB 91.96100% -99 - C2 -4QG7 9.2 KTHY_STAAR
10 PsiBlast_PDB 91.62100%-106 - C2 -4HLC 9.0 KTHY_STAAR
8 PsiBlast_PDB 91.51100%-100 - C2 -4HDC 10.1 KTHY_STAAN
7 PsiBlast_PDB 90.85100%-105 - C2 -4GSY 9.7 KTHY_STAAR
6 PsiBlast_PDB 89.74100%-105 - C2 -4GFD 10.1 KTHY_STAAM
53 PsiBlast_CBE 71.3741% -89 - C2 -3HJN 5.3 KTHY_THEMA
52 PsiBlast_CBE 69.1441% -81 - C2 -3HJN 6.0 KTHY_THEMA
45 PsiBlast_CBE 69.0837% -83 - C2 -3UXM 3.8 KTHY_PSEAE
84 HHSearch 68.9142% -81 - C2 -3HJN 6.0 KTHY_THEMA
37 PsiBlast_CBE 68.9137% -78 - C2 -4GMD 5.7 KTHY_PSEAE
46 PsiBlast_CBE 68.6637% -76 - C2 -3UWK 4.8 KTHY_PSEAE
20 PsiBlast_PDB 68.6537% -81 - C2 -4ESH 3.4 KTHY_PSEAE
43 PsiBlast_CBE 68.6137% -76 - C2 -3UXM 4.1 KTHY_PSEAE
38 PsiBlast_CBE 68.6137% -78 - C2 -4GMD 5.2 KTHY_PSEAE
19 PsiBlast_PDB 68.6137% -68 - C2 -4EDH 4.4 KTHY_PSEAE
64 PsiBlast_CBE 68.3734% -82 - C2 -3LV8 6.4 KTHY_VIBCH
42 PsiBlast_CBE 68.3137% -72 - C2 -3UXM 3.4 KTHY_PSEAE
44 PsiBlast_CBE 68.2737% -72 - C2 -3UXM 4.3 KTHY_PSEAE
39 PsiBlast_CBE 67.8937% -74 - C2 -4GMD 5.6 KTHY_PSEAE
41 PsiBlast_CBE 67.7837% -70 - C2 -4EDH 4.4 KTHY_PSEAE
49 PsiBlast_CBE 67.5937% -78 - C2 -3UWO 5.1 KTHY_PSEAE
48 PsiBlast_CBE 67.2737% -80 - C2 -3UWO 4.7 KTHY_PSEAE
95 Fugue 67.0433% -73 - C2 -4TMK 11.4 KTHY_ECOLI
47 PsiBlast_CBE 67.0037% -70 - C2 -3UWK 4.7 KTHY_PSEAE
40 PsiBlast_CBE 66.9137% -77 - C2 -4GMD 6.6 KTHY_PSEAE
63 PsiBlast_CBE 66.6934% -77 - C2 -3N2I 5.2 KTHY_VIBCH
61 PsiBlast_CBE 66.5732% -74 - C2 -4TMK 11.3 KTHY_ECOLI
79 HHSearch 66.5133% -73 - C2 -3LV8 6.3 KTHY_VIBCH
60 PsiBlast_CBE 66.1932% -75 - C2 -5TMP 11.1 KTHY_ECOLI
62 PsiBlast_CBE 65.0534% -71 - C2 -3N2I 5.2 KTHY_VIBCH
58 PsiBlast_CBE 64.9335% -86 - C2 -3V9P 3.3 KTHY_BURTA
76 HHSearch 64.3234% -73 - C2 -3V9P 3.2 KTHY_BURTA
59 PsiBlast_CBE 63.3835% -80 - C2 -3V9P 3.2 KTHY_BURTA
56 PsiBlast_CBE 60.7937% -90 - C2 -3LD9 2.5 KTHY_EHRCR
54 PsiBlast_CBE 60.0137% -88 - C2 -3LD9 2.6 KTHY_EHRCR