@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0458: (2016-03-15 )
MLNNEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAATINIVVPYYGYARQDRKARSREPITAKLVANLIETAGATRMIALDLHAPQIQGFFDIPIDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPRPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPVLSGPAKERIENSAIKELIVTNSIHLDEDRKPSNTKELSVAGLIAQAIIRVYERESVSVLFD

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ABM_F_6(1DKU)
KPRS_BACSU
[Raw transfer]




AMP_B_13(3DAH)
?
[Raw transfer]




AMP_B_12(2HCR)
PRPS1_HUMAN
[Raw transfer]




AMP_B_12(3DAH)
?
[Raw transfer]




ADP_A_7(3LRT)
KPRS_THEVO
[Raw transfer]




AMP_A_11(2HCR)
PRPS1_HUMAN
[Raw transfer]




AMP_A_11(3DAH)
?
[Raw transfer]




ADP_A_8(3MBI)
KPRS_THEVO
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




AMP_K_11(1U9Z)
KPRS_METJA
[Raw transfer]




AMP_J_10(1U9Z)
KPRS_METJA
[Raw transfer]




AMP_I_9(1U9Z)
KPRS_METJA
[Raw transfer]




AMP_L_12(1U9Z)
KPRS_METJA
[Raw transfer]




22 PsiBlast_CBE 98.2876%-159 - C9 -1DKR - KPRS_BACSU -
21 PsiBlast_CBE 97.6976%-162 - C9 -1DKU 3.2 KPRS_BACSU
64 HHSearch 96.6977%-160 - C9 -1DKU 2.9 KPRS_BACSU
82 Fugue 96.6778%-157 - C9 -1DKU 2.9 KPRS_BACSU
1 PsiBlast_PDB 96.6476%-160 - C9 -1DKU - KPRS_BACSU -
23 PsiBlast_CBE 89.2554%-144 - C9 -3DAH 3.1 ?
24 PsiBlast_CBE 86.9754%-142 - C9 -3DAH 3.7 ?
4 PsiBlast_PDB 85.7545%-148 - C9 -4LYG - PRPS1_HUMAN -
34 PsiBlast_CBE 85.4745%-146 - C9 -4M0P - PRPS1_HUMAN -
28 PsiBlast_CBE 85.3545%-146 - C9 -4LZN - PRPS1_HUMAN -
63 HHSearch 85.1854%-141 - C9 -3DAH 3.0 ?
2 PsiBlast_PDB 85.0354%-140 - C9 -3DAH - ? -
6 PsiBlast_PDB 85.0245%-146 - C9 -4LZN - PRPS1_HUMAN -
25 PsiBlast_CBE 84.8045%-144 - C9 -2H08 - PRPS1_HUMAN -
31 PsiBlast_CBE 84.7545%-142 - C9 -3EFH - PRPS1_HUMAN -
62 HHSearch 84.7245%-146 - C9 -3S5J - PRPS1_HUMAN -
9 PsiBlast_PDB 84.6845%-145 - C9 -2HCR 4.2 PRPS1_HUMAN
3 PsiBlast_PDB 84.4645%-147 - C9 -2H08 - PRPS1_HUMAN -
27 PsiBlast_CBE 84.4045%-143 - C9 -4LZO - PRPS1_HUMAN -
11 PsiBlast_PDB 84.3845%-145 - C9 -3S5J - PRPS1_HUMAN -
32 PsiBlast_CBE 82.8945%-145 - C9 -2HCR 3.4 PRPS1_HUMAN
48 PsiBlast_CBE 62.9331%-135 - C9 -1U9Z 3.8 KPRS_METJA
19 PsiBlast_PDB 62.9131%-135 - C9 -1U9Z 3.9 KPRS_METJA
47 PsiBlast_CBE 62.8631%-135 - C9 -1U9Z 2.9 KPRS_METJA
49 PsiBlast_CBE 62.5631%-135 - C9 -1U9Z 3.9 KPRS_METJA