@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0469: (2016-03-15 )
MQKAFRNVLVIVIIGVIIFGLFSYLNGNGNMPKQLTYNQFTEKLEKGDLKTLEIQPQQNVYMVSGKTKNDEDYSSTILYNNEKELQKITDAAKKQNGVKLTIKEEEKQSVFVSILSTLIPVVVIALLFIFFLSQAQGGGSGGRMMNFGKSKAKMYDNNKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKEMGSRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFDNAKKNAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGRPDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAVREGKKKIDMRDIEEATDRVIAGPAKKSRVISKKERNIVAHHEAGHTIIGMVLDEAEVVHKVTIVPRGQAGGYAMMLPKQDRFLMTEQELLDKICGLLGGRVSEDINFNEVSTGASNDFERATQIARSMVTQYGMSKKLGPLQFGHSNGQVFLGKDMQGEPNYSSQIAYEIDKEVQRIVKEQYERCKQILLEHKEQLILIAETLLTEETLVAEQIQSLFYEGKLPEIDYDAAKVVKDEDSEFNDGKFGKSYEEIRKEQLEDGQRDESEDRKEEKDIAEDKKEADKSDEKDEPAHRQAPNIEKPYDPNHPDNK

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_3(4KO8)
TERA_HUMAN
[Raw transfer]



AGS_B_5(4KO8)
TERA_HUMAN
[Raw transfer]



ADP_C_8(2R65)
FTSH_HELPY
[Raw transfer]



ADP_C_9(4WW0)
FTSH_AQUAE
[Raw transfer]



ADP_A_2(2QZ4)

[Raw transfer]



ADP_B_5(3H4M)
PAN_METJA
[Raw transfer]



ADP_A_2(2QZ4)

[Raw transfer]



ADP_A_5(4WW0)
FTSH_AQUAE
[Raw transfer]



AGS_B_5(3HU3)
TERA_HUMAN
[Raw transfer]



ATP_A_3(2ZAN)
VPS4B_MOUSE
[Raw transfer]



ADP_E_10(2R65)
FTSH_HELPY
[Raw transfer]



ADP_B_7(4WW0)
FTSH_AQUAE
[Raw transfer]



AGS_A_3(3HU3)
TERA_HUMAN
[Raw transfer]



ADP_C_6(3H4M)
PAN_METJA
[Raw transfer]



ADP_B_7(2R65)
FTSH_HELPY
[Raw transfer]



ADP_D_9(2R65)
FTSH_HELPY
[Raw transfer]



ADP_A_6(2R65)
FTSH_HELPY
[Raw transfer]



ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]



ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]



ADP_A_2(1E32)
TERA_MOUSE
[Raw transfer]



ADP_A_3(3D8B)
FIGL1_HUMAN
[Raw transfer]



ADP_G_7(1R7R)
TERA_MOUSE
[Raw transfer]



ADP_A_2(1E32)
TERA_MOUSE
[Raw transfer]



ANP_B_2(1IY0)
FTSH_THET8
[Raw transfer]



ADP_B_2(1IY1)
FTSH_THET8
[Raw transfer]
1 PsiBlast_PDB 91.1560% -84 - C2 -3KDS - FTSH_THEMA -
22 PsiBlast_CBE 90.7960% -83 - C2 -2CEA - FTSH_THEMA -
23 PsiBlast_CBE 90.3760% -83 - C2 -2CEA - FTSH_THEMA -
25 PsiBlast_CBE 90.3060% -80 - C2 -2CE7 - FTSH_THEMA -
26 PsiBlast_CBE 89.5860% -81 - C2 -2CE7 - FTSH_THEMA -
125 Fugue 89.5660% -83 - C2 -2CE7 - FTSH_THEMA -
28 PsiBlast_CBE 88.2159% -74 - C2 -2DHR - FTSH_THET8 -
30 PsiBlast_CBE 88.1759% -74 - C2 -2DHR - FTSH_THET8 -
24 PsiBlast_CBE 87.6460% -78 - C2 -2CE7 - FTSH_THEMA -
21 PsiBlast_CBE 87.5060% -81 - C2 -2CEA - FTSH_THEMA -
102 HHSearch 87.2860% -75 - C2 -2DHR - FTSH_THET8 -
2 PsiBlast_PDB 86.7959% -73 - C2 -2DHR - FTSH_THET8 -
5 PsiBlast_PDB 86.5856% -82 - C2 -4Z8X - FTSH_AQUAE -
37 PsiBlast_CBE 86.4556% -83 - C2 -4Z8X - FTSH_AQUAE -
39 PsiBlast_CBE 86.1456% -83 - C2 -4WW0 8.4 FTSH_AQUAE
35 PsiBlast_CBE 85.9559% -69 - C2 -4EIW - FTSH_THET8 -
33 PsiBlast_CBE 85.9559% -70 - C2 -4EIW - FTSH_THET8 -
38 PsiBlast_CBE 85.8556% -82 - C2 -4Z8X - FTSH_AQUAE -
40 PsiBlast_CBE 85.6456% -81 - C2 -4WW0 8.5 FTSH_AQUAE
4 PsiBlast_PDB 85.3156% -86 - C2 -4WW0 8.6 FTSH_AQUAE
10 PsiBlast_PDB 70.9773% -79 - C2 -1IY1 5.7 FTSH_THET8
9 PsiBlast_PDB 70.6773% -78 - C2 -1IY0 5.4 FTSH_THET8
42 PsiBlast_CBE 68.4662% -93 - C2 -2R65 5.3 FTSH_HELPY
12 PsiBlast_PDB 66.4362% -82 - C2 -2R65 6.0 FTSH_HELPY
46 PsiBlast_CBE 65.5847% -76 - C2 -3H4M 6.8 PAN_METJA
41 PsiBlast_CBE 65.4262% -77 - C2 -2R65 5.9 FTSH_HELPY
44 PsiBlast_CBE 65.4062% -80 - C2 -2R65 5.3 FTSH_HELPY
14 PsiBlast_PDB 64.5547% -74 - C2 -3H4M 6.8 PAN_METJA
43 PsiBlast_CBE 64.3962% -78 - C2 -2R65 6.8 FTSH_HELPY
118 HHSearch 64.1844% -70 - C2 -3H4M 6.7 PAN_METJA
96 PsiBlast_CBE 63.6545% -83 - C2 -4KO8 7.8 TERA_HUMAN
95 PsiBlast_CBE 63.3245% -82 - C2 -4KO8 7.6 TERA_HUMAN
45 PsiBlast_CBE 63.2947% -76 - C2 -3H4M 6.2 PAN_METJA
97 PsiBlast_CBE 62.9445% -83 - C2 -3HU3 8.1 TERA_HUMAN
98 PsiBlast_CBE 61.9045% -83 - C2 -3HU3 7.8 TERA_HUMAN
111 HHSearch 61.2351% -83 - C2 -2QZ4 8.2
13 PsiBlast_PDB 60.4050% -82 - C2 -2QZ4 8.2
70 PsiBlast_CBE 59.9145% -88 - C2 -1R7R 4.4 TERA_MOUSE
69 PsiBlast_CBE 59.7145% -86 - C2 -1E32 6.7 TERA_MOUSE
114 HHSearch 58.4138% -81 - C2 -2ZAN 7.1 VPS4B_MOUSE
121 HHSearch 58.1036% -73 - C2 -3D8B 8.3 FIGL1_HUMAN
126 Fugue 53.5130% -40 - C2 -1E32 6.7 TERA_MOUSE