@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0471: (2016-03-15 )
MAQKPVDNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD

Atome Classification :

(71 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PUS_A_3(3X44)
?
[Raw transfer]



PUS_A_3(3X44)
?
[Raw transfer]



PUS_B_4(3X44)
?
[Raw transfer]



PDA_A_2(2Q3D)
CYSK_MYCTU
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



P1T_X_3(5DBH)
?
[Raw transfer]



AA5_A_2(1Z7Y)
CYSK1_ARATH
[Raw transfer]



ILE_A_3(4IL5)
?
[Raw transfer]



AWH_A_3(3ZEI)
CYSK_MYCTU
[Raw transfer]



MET_B_4(4JBL)
?
[Raw transfer]



4AT_A_4(2EFY)
?
[Raw transfer]



CYS_A_2(4LMB)
?
[Raw transfer]



OAS_X_3(4ZU6)
CYSK_HAEIN
[Raw transfer]



4AT_B_6(2EFY)
?
[Raw transfer]



PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]



CHAIN_C_2(4JBN)
?
[Raw transfer]
-
PLP_D_4(1D6S)
CYSK_SALTY
[Raw transfer]



4MV_A_3(2ECO)
?
[Raw transfer]



FGA_B_11(4AIR)
?
[Raw transfer]



PLP_B_10(3BM5)
?
[Raw transfer]



PLP_A_2(2ECQ)
?
[Raw transfer]



PLP_A_3(4L0D)
CBS_HUMAN
[Raw transfer]



PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_A_9(3BM5)
?
[Raw transfer]



PLP_A_13(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_C_14(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_3(2EFY)
?
[Raw transfer]



PLP_B_4(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_B_6(3VBE)
?
[Raw transfer]



PLP_A_5(3VBE)
?
[Raw transfer]



PLP_B_5(2EFY)
?
[Raw transfer]



PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_A_2(2ECO)
?
[Raw transfer]



PLP_A_5(2PQM)
?
[Raw transfer]



PLP_C_7(3VBE)
?
[Raw transfer]



PLP_A_3(1VE1)
?
[Raw transfer]



PLP_A_4(4LMB)
?
[Raw transfer]



PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_A_3(1VE1)
?
[Raw transfer]



PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_D_16(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]



PLP_A_5(2PQM)
?
[Raw transfer]



PLP_B_6(2PQM)
?
[Raw transfer]



PLP_B_7(4LMA)
?
[Raw transfer]



PLP_A_5(4LMA)
?
[Raw transfer]



PLP_B_15(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]



PLP_X_4(4ZU6)
CYSK_HAEIN
[Raw transfer]



PLP_B_7(4PCU)
CBS_HUMAN
[Raw transfer]



PLP_A_4(4PCU)
CBS_HUMAN
[Raw transfer]



PLP_D_8(3VBE)
?
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



PLP_C_9(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]



PLP_B_8(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_D_11(2BHS)
CYSM_ECOLI
[Raw transfer]



FGA_B_10(4AIR)
?
[Raw transfer]



3HL_A_3(2ECQ)
?
[Raw transfer]



CYS_A_3(4LMB)
?
[Raw transfer]



CHAIN_P_3(1Y7L)
CYSK_HAEIN
[Raw transfer]
-
FGA_B_9(4AIR)
?
[Raw transfer]



MPD_A_4(2Q3B)
CYSK_MYCTU
[Raw transfer]



CHAIN_B_2(3TBH)
?
[Raw transfer]
-
CHAIN_B_2(3TBH)
?
[Raw transfer]
-
CHAIN_B_3(2ISQ)
CYSK1_ARATH
[Raw transfer]
-
CHAIN_B_2(3T4P)
?
[Raw transfer]
-
113 HHSearch 91.7569% -91 - C3 -2EGU - ? -
1 PsiBlast_PDB 91.6068% -91 - C3 -2EGU - ? -
120 HHSearch 90.1353% -68 * C3 *1VE1 4.2 ?
10 PsiBlast_PDB 89.8453% -72 - C3 -2ECO 3.9 ?
11 PsiBlast_PDB 89.8253% -70 - C3 -2ECQ 3.7 ?
9 PsiBlast_PDB 89.7553% -70 - C3 -1VE1 4.2 ?
12 PsiBlast_PDB 89.3853% -70 - C3 -2EFY 4.0 ?
25 PsiBlast_CBE 89.1153% -70 - C3 -2EFY 4.0 ?
4 PsiBlast_PDB 87.9358% -60 - C3 -2Q3D 8.0 CYSK_MYCTU
41 PsiBlast_CBE 87.9048% -68 - C3 -3X43 - ? -
39 PsiBlast_CBE 87.6448% -69 - C3 -3X43 - ? -
28 PsiBlast_CBE 86.7052% -77 - C3 -1OAS 3.6 CYSK_SALTY
40 PsiBlast_CBE 86.6448% -66 - C3 -3X43 - ? -
3 PsiBlast_PDB 86.6258% -67 - C3 -3ZEI 6.1 CYSK_MYCTU
35 PsiBlast_CBE 86.5948% -67 - C3 -3X43 - ? -
36 PsiBlast_CBE 86.4448% -66 - C3 -3X43 - ? -
6 PsiBlast_PDB 86.3158% -66 - C3 -2Q3B 3.0 CYSK_MYCTU
119 HHSearch 86.3054% -65 - C3 -1O58 - ? -
19 PsiBlast_PDB 86.1752% -76 - C3 -1OAS 3.8 CYSK_SALTY
117 HHSearch 86.1647% -61 - C3 -3TBH 4.8 ?
43 PsiBlast_CBE 86.0648% -61 - C3 -3X44 7.4 ?
42 PsiBlast_CBE 85.9948% -61 - C3 -3X44 7.2 ?
101 Fugue 85.9651% -68 - C3 -1OAS 3.8 CYSK_SALTY
32 PsiBlast_CBE 85.8651% -67 - C3 -1D6S 4.8 CYSK_SALTY
112 HHSearch 85.7556% -66 - C3 -2Q3B 3.0 CYSK_MYCTU
111 HHSearch 85.6447% -61 - C3 -3X44 7.4 ?
33 PsiBlast_CBE 85.3651% -66 - C3 -1D6S 5.0 CYSK_SALTY
15 PsiBlast_PDB 85.2752% -55 - C3 -4LMB 4.2 ?
45 PsiBlast_CBE 85.1048% -58 - C3 -3TBH 4.8 ?
46 PsiBlast_CBE 85.0448% -60 - C3 -3T4P 6.8 ?
14 PsiBlast_PDB 84.8552% -66 - C3 -1Z7W 4.5 CYSK1_ARATH
16 PsiBlast_PDB 84.5752% -64 - C3 -1Z7Y 3.9 CYSK1_ARATH
114 HHSearch 84.1651% -67 - C3 -1Z7W 4.5 CYSK1_ARATH
31 PsiBlast_CBE 83.9352% -72 - C3 -1FCJ 3.7 CYSK_SALTY
18 PsiBlast_PDB 83.5053% -67 - C3 -2ISQ 7.6 CYSK1_ARATH
20 PsiBlast_PDB 83.4352% -72 - C3 -1FCJ 3.8 CYSK_SALTY
48 PsiBlast_CBE 83.1648% -64 - C3 -3VBE 4.2 ?
50 PsiBlast_CBE 83.1248% -65 - C3 -3VBE 4.4 ?
51 PsiBlast_CBE 83.1048% -66 - C3 -3VBE 4.0 ?
29 PsiBlast_CBE 83.0652% -71 - C3 -1FCJ 3.6 CYSK_SALTY
17 PsiBlast_PDB 83.0151% -62 - C3 -4AEC 4.5 CYSKM_ARATH
26 PsiBlast_CBE 83.0052% -58 - C3 -4LMA 4.4 ?
27 PsiBlast_CBE 82.8451% -61 - C3 -4AEC 4.1 CYSKM_ARATH
49 PsiBlast_CBE 82.7848% -61 - C3 -3VBE 3.8 ?
58 PsiBlast_CBE 82.7046% -72 - C3 -2PQM 3.7 ?
30 PsiBlast_CBE 82.4652% -69 - C3 -1FCJ 3.2 CYSK_SALTY
13 PsiBlast_PDB 82.2752% -60 - C3 -4LMA 3.9 ?
59 PsiBlast_CBE 82.1846% -69 - C3 -2PQM 3.8 ?
116 HHSearch 82.1449% -69 - C3 -1Y7L 5.8 CYSK_HAEIN
121 HHSearch 82.0945% -67 - C3 -2PQM 3.7 ?
72 PsiBlast_CBE 81.8645% -70 - C3 -4JBN 3.1 ?
74 PsiBlast_CBE 81.6345% -69 - C3 -4IL5 3.3 ?
60 PsiBlast_CBE 81.5646% -64 - C3 -3BM5 3.8 ?
61 PsiBlast_CBE 81.2946% -69 - C3 -3BM5 5.3 ?
62 PsiBlast_CBE 81.2349% -60 - C3 -5DBH 7.4 ?
75 PsiBlast_CBE 81.1745% -63 - C3 -4JBL 3.9 ?
102 Fugue 80.4640% -54 - C3 -3PC3 8.2 ?
122 HHSearch 79.0339% -55 - C3 -3PC3 8.2 ?
84 PsiBlast_CBE 78.2838% -62 - C3 -4COO 4.2 CBS_HUMAN
118 HHSearch 78.2139% -59 - C3 -3DWG 3.8 CYSM_MYCTU
99 PsiBlast_CBE 77.7638% -66 - C3 -4PCU 3.3 CBS_HUMAN
83 PsiBlast_CBE 77.2538% -59 - C3 -4L0D 3.6 CBS_HUMAN
82 PsiBlast_CBE 77.2238% -60 - C3 -4L0D 5.1 CBS_HUMAN
85 PsiBlast_CBE 77.0338% -58 - C3 -4COO 4.3 CBS_HUMAN
100 PsiBlast_CBE 76.8338% -65 - C3 -4PCU 3.7 CBS_HUMAN
79 PsiBlast_CBE 76.0140% -60 - C3 -2BHS 3.7 CYSM_ECOLI
81 PsiBlast_CBE 75.9940% -61 - C3 -2BHS 3.6 CYSM_ECOLI
80 PsiBlast_CBE 75.8340% -63 - C3 -2BHS 3.6 CYSM_ECOLI
44 PsiBlast_CBE 75.4447% -63 - C3 -4AIR 3.3 ?
78 PsiBlast_CBE 74.5240% -60 - C3 -2BHS 3.6 CYSM_ECOLI
63 PsiBlast_CBE 49.2749% 27 - C3 -4ZU6 3.8 CYSK_HAEIN