@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0474: (2016-03-15 )
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRYK

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A4P_A_4(1EX8)
HPPK_ECOLI
[Raw transfer]




J1C_A_2(3UDV)
HPPK_ECOLI
[Raw transfer]




J1D_A_2(4F7V)
HPPK_ECOLI
[Raw transfer]




PMM_A_3(2BMB)

[Raw transfer]




HH2_A_2(1RB0)
HPPK_ECOLI
[Raw transfer]




GSY_A_3(4AD6)
?
[Raw transfer]




PMM_A_3(2BMB)

[Raw transfer]




J1B_A_2(3UDE)
HPPK_ECOLI
[Raw transfer]




GSY_B_4(4AD6)
?
[Raw transfer]




J1A_A_2(3UD5)
HPPK_ECOLI
[Raw transfer]




87Y_A_3(1DY3)
HPPK_ECOLI
[Raw transfer]




HH2_A_3(1RAO)
HPPK_ECOLI
[Raw transfer]




B55_B_4(3QBC)
?
[Raw transfer]




ROI_E_5(1CBK)
HPPK_HAEIN
[Raw transfer]




ROI_E_5(1CBK)
HPPK_HAEIN
[Raw transfer]




ROI_F_6(1CBK)
HPPK_HAEIN
[Raw transfer]




B55_A_3(3QBC)
?
[Raw transfer]




ROI_E_5(1CBK)
HPPK_HAEIN
[Raw transfer]




GOL_B_15(3HSD)
HPPK_ECOLI
[Raw transfer]




GOL_A_9(3HSD)
HPPK_ECOLI
[Raw transfer]




GOL_A_10(3HSD)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5L)
HPPK_ECOLI
[Raw transfer]




ATP_A_2(1DY3)
HPPK_ECOLI
[Raw transfer]




APC_A_5(1F9H)
HPPK_ECOLI
[Raw transfer]




APC_C_15(4CYU)
?
[Raw transfer]




APC_A_7(4CYU)
?
[Raw transfer]




APC_A_5(4M5I)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4CRJ)
?
[Raw transfer]




APC_A_9(1Q0N)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5J)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5H)
HPPK_ECOLI
[Raw transfer]




APC_A_3(3ILO)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5K)
HPPK_ECOLI
[Raw transfer]




APC_A_4(3HD2)
HPPK_ECOLI
[Raw transfer]




APC_A_4(3HD1)
HPPK_ECOLI
[Raw transfer]




APC_A_4(4CWB)
?
[Raw transfer]




APC_B_9(4M5N)
HPPK_ECOLI
[Raw transfer]




APC_B_17(1TMM)
HPPK_ECOLI
[Raw transfer]




APC_A_4(3HT0)
HPPK_ECOLI
[Raw transfer]




APC_A_3(4M5M)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5G)
HPPK_ECOLI
[Raw transfer]




APC_A_9(1HQ2)
HPPK_ECOLI
[Raw transfer]




APC_D_18(4CYU)
?
[Raw transfer]




APC_A_5(4M5N)
HPPK_ECOLI
[Raw transfer]




APC_A_15(1TMM)
HPPK_ECOLI
[Raw transfer]




APC_A_4(3HSG)
HPPK_ECOLI
[Raw transfer]




APC_A_2(3KUH)
HPPK_ECOLI
[Raw transfer]




APC_A_7(2QX0)
?
[Raw transfer]




GOL_A_9(1RTZ)
HPPK_ECOLI
[Raw transfer]




GOL_A_5(3HSJ)
HPPK_ECOLI
[Raw transfer]




ADP_A_4(1EQM)
HPPK_ECOLI
[Raw transfer]




APC_A_5(1RU2)
HPPK_ECOLI
[Raw transfer]




APC_A_8(1RU1)
HPPK_ECOLI
[Raw transfer]




APC_B_10(1RU1)
HPPK_ECOLI
[Raw transfer]




APC_A_3(3ILJ)
HPPK_ECOLI
[Raw transfer]




EDO_A_4(3UD5)
HPPK_ECOLI
[Raw transfer]




TRS_A_4(3HSZ)
HPPK_ECOLI
[Raw transfer]




EDO_A_3(3UD5)
HPPK_ECOLI
[Raw transfer]




TRS_A_3(3HCX)
HPPK_ECOLI
[Raw transfer]




1 PsiBlast_PDB 97.03100%-128 - C11 -3QBC 3.8 ?
24 PsiBlast_CBE 96.61100%-136 - C11 -3QBC 3.4 ?
2 PsiBlast_PDB 96.35100%-128 - C11 -4AD6 3.7 ?
23 PsiBlast_CBE 96.20100%-132 - C11 -4AD6 3.9 ?
22 PsiBlast_CBE 96.09100%-134 - C11 -4CYU 6.4 ?
21 PsiBlast_CBE 95.77100%-134 - C11 -4CYU 4.0 ?
4 PsiBlast_PDB 95.58100%-128 - C11 -4CWB 7.3 ?
3 PsiBlast_PDB 95.28100%-130 - C11 -4CRJ 7.5 ?
5 PsiBlast_PDB 94.10100%-135 - C11 -4CYU - ? -
25 PsiBlast_CBE 93.4999%-137 - C11 -4CYU 6.7 ?
37 PsiBlast_CBE 76.4942%-150 - C11 -2BMB 4.7
12 PsiBlast_PDB 76.4840%-121 - C11 -4M5L 6.8 HPPK_ECOLI
13 PsiBlast_PDB 76.4640%-125 - C11 -4M5M 7.2 HPPK_ECOLI
42 PsiBlast_CBE 76.4440%-136 - C11 -1G4C - HPPK_ECOLI -
52 PsiBlast_CBE 76.3240%-139 - C11 -3HT0 5.2 HPPK_ECOLI
9 PsiBlast_PDB 76.3140%-121 - C11 -4M5I 6.9 HPPK_ECOLI
34 PsiBlast_CBE 76.2840%-131 - C11 -3HSD 3.5 HPPK_ECOLI
8 PsiBlast_PDB 76.1640%-120 - C11 -4M5H 6.6 HPPK_ECOLI
15 PsiBlast_PDB 75.9740%-123 - C11 -1DY3 7.0 HPPK_ECOLI
62 HHSearch 75.9038%-120 - C11 -2QX0 5.4 ?
44 PsiBlast_CBE 75.6840%-122 - C11 -1F9H 7.5 HPPK_ECOLI
30 PsiBlast_CBE 75.4940%-136 - C11 -3UDE 8.5 HPPK_ECOLI
55 PsiBlast_CBE 75.2840%-122 - C11 -1TMM 5.9 HPPK_ECOLI
11 PsiBlast_PDB 75.2740%-121 - C11 -4M5K 6.8 HPPK_ECOLI
31 PsiBlast_CBE 75.2140%-137 - C11 -3UD5 6.9 HPPK_ECOLI
38 PsiBlast_CBE 75.1640%-137 - C11 -3HD2 5.2 HPPK_ECOLI
10 PsiBlast_PDB 74.9640%-122 - C11 -4M5J 6.6 HPPK_ECOLI
16 PsiBlast_PDB 74.8940%-122 - C11 -1EX8 8.9 HPPK_ECOLI
27 PsiBlast_CBE 74.7740%-120 - C11 -4M5N 6.3 HPPK_ECOLI
46 PsiBlast_CBE 74.7340%-138 - C11 -3HD1 5.3 HPPK_ECOLI
19 PsiBlast_PDB 74.6840%-122 - C11 -1Q0N 6.5 HPPK_ECOLI
56 PsiBlast_CBE 74.5040%-121 - C11 -1TMM 5.4 HPPK_ECOLI
20 PsiBlast_PDB 74.5040%-135 - C11 -1RAO 3.3 HPPK_ECOLI
7 PsiBlast_PDB 74.4440%-119 - C11 -4M5G 6.7 HPPK_ECOLI
29 PsiBlast_CBE 74.4340%-138 - C11 -3UDV 8.1 HPPK_ECOLI
53 PsiBlast_CBE 74.4040%-133 - C11 -3HSZ 3.4 HPPK_ECOLI
54 PsiBlast_CBE 74.3940%-121 - C11 -3KUH 6.0 HPPK_ECOLI
50 PsiBlast_CBE 74.2740%-130 - C11 -3ILJ 4.6 HPPK_ECOLI
35 PsiBlast_CBE 74.2140%-125 - C11 -3HSD 2.1 HPPK_ECOLI
14 PsiBlast_PDB 74.2040%-123 - C11 -4M5N 6.4 HPPK_ECOLI
48 PsiBlast_CBE 74.1940%-124 - C11 -3ILO 7.0 HPPK_ECOLI
41 PsiBlast_CBE 73.8940%-120 - C11 -1HQ2 6.5 HPPK_ECOLI
63 HHSearch 73.5639%-114 - C11 -1CBK 3.4 HPPK_HAEIN
45 PsiBlast_CBE 73.3840%-137 - C11 -3HSJ 1.9 HPPK_ECOLI
17 PsiBlast_PDB 73.3140%-129 - C11 -1EQM 3.3 HPPK_ECOLI
33 PsiBlast_CBE 73.1340%-123 - C11 -3HSG 6.2 HPPK_ECOLI
6 PsiBlast_PDB 73.0440%-117 - C11 -1CBK 3.4 HPPK_HAEIN
59 PsiBlast_CBE 72.8037%-124 - C11 -1RU1 4.7 HPPK_ECOLI
26 PsiBlast_CBE 72.7940%-121 - C11 -1CBK 3.5 HPPK_HAEIN
28 PsiBlast_CBE 72.7340%-124 - C11 -4F7V 9.7 HPPK_ECOLI
66 HHSearch 72.6537%-130 - C11 -2BMB 4.7
47 PsiBlast_CBE 72.4440%-130 - C11 -3HCX 2.8 HPPK_ECOLI
32 PsiBlast_CBE 72.2640%-125 - C11 -1RB0 4.5 HPPK_ECOLI
61 PsiBlast_CBE 72.1837%-124 - C11 -1RTZ 2.6 HPPK_ECOLI
58 PsiBlast_CBE 71.7137%-136 - C11 -1RU2 4.7 HPPK_ECOLI
60 PsiBlast_CBE 71.6037%-135 * C11 *1RU1 4.8 HPPK_ECOLI
72 Fugue 70.4236%-102 - C11 -1CBK 3.8 HPPK_HAEIN