@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0475: (2016-03-15 )
MSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LAD_B_2(1E1T)
SYK2_ECOLI
[Raw transfer]



ACP_A_3(1E22)
SYK2_ECOLI
[Raw transfer]



LAD_A_2(4UP7)
?
[Raw transfer]



ATP_A_3(1E24)
SYK2_ECOLI
[Raw transfer]



ANP_A_2(4UPA)
?
[Raw transfer]



ATP_A_2(4UP9)
?
[Raw transfer]



GOL_B_9(1E1T)
SYK2_ECOLI
[Raw transfer]



GOL_B_11(1E1O)
SYK2_ECOLI
[Raw transfer]



KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]



KRS_B_8(4YCU)
SYK_HUMAN
[Raw transfer]



LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]



LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]



LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]
2 PsiBlast_PDB 98.7572% -79 - C5 -3E9I - SYK_GEOSE -
22 PsiBlast_CBE 98.3472% -80 - C5 -3E9I - SYK_GEOSE -
26 PsiBlast_CBE 98.3372% -78 - C5 -3E9H - SYK_GEOSE -
27 PsiBlast_CBE 98.2972% -80 - C5 -3A74 - SYK_GEOSE -
29 PsiBlast_CBE 98.1872% -80 - C5 -3A74 - SYK_GEOSE -
24 PsiBlast_CBE 97.8072% -79 - C5 -3E9H - SYK_GEOSE -
3 PsiBlast_PDB 97.5572% -79 - C5 -3A74 - SYK_GEOSE -
1 PsiBlast_PDB 97.3772% -80 - C5 -3E9H - SYK_GEOSE -
78 HHSearch 97.3573% -79 - C5 -3A74 - SYK_GEOSE -
21 PsiBlast_CBE 97.2972% -78 - C5 -3E9I - SYK_GEOSE -
28 PsiBlast_CBE 97.1772% -79 - C5 -3A74 - SYK_GEOSE -
23 PsiBlast_CBE 96.7972% -77 - C5 -3E9I - SYK_GEOSE -
25 PsiBlast_CBE 96.7172% -80 - C5 -3E9H - SYK_GEOSE -
4 PsiBlast_PDB 92.2153% -71 - C5 -1LYL - SYK2_ECOLI -
6 PsiBlast_PDB 91.4853% -72 - C5 -1E1T 8.6 SYK2_ECOLI
5 PsiBlast_PDB 91.4153% -74 - C5 -1E1O 3.3 SYK2_ECOLI
68 Fugue 91.1952% -69 - C5 -1LYL - SYK2_ECOLI -
8 PsiBlast_PDB 90.9953% -74 - C5 -1E24 7.0 SYK2_ECOLI
30 PsiBlast_CBE 90.6453% -74 - C5 -1LYL - SYK2_ECOLI -
7 PsiBlast_PDB 90.5853% -73 - C5 -1E22 7.1 SYK2_ECOLI
79 HHSearch 90.4753% -72 - C5 -1E1O 3.3 SYK2_ECOLI
9 PsiBlast_PDB 90.0152% -70 - C5 -1BBU 2.7 SYK1_ECOLI
11 PsiBlast_PDB 89.1952% -75 - C5 -4EX5 3.2 SYK_BURTA
32 PsiBlast_CBE 88.9652% -75 - C5 -4EX5 3.1 SYK_BURTA
36 PsiBlast_CBE 84.8942% -68 - C5 -4YCU 6.6 SYK_HUMAN
14 PsiBlast_PDB 84.6042% -68 - C5 -4YCU 6.2 SYK_HUMAN
20 PsiBlast_PDB 78.3437% -67 - C5 -4UPA 6.1 ?
52 PsiBlast_CBE 77.7137% -62 - C5 -4UP7 7.5 ?
19 PsiBlast_PDB 77.7137% -65 - C5 -4UP9 5.4 ?