@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0506: (2016-03-16 )
MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDSVAQSYDMIDNAPEEKERGITINTSHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEEKILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_B_6(1EFC)
EFTU1_ECOLI
[Raw transfer]



GNP_A_2(4H9G)
EFTU1_THETH
[Raw transfer]



GDP_A_5(1EFC)
EFTU1_ECOLI
[Raw transfer]



GDP_B_(1D8T)
EFTU1_ECOLI
[Raw transfer]



GDP_H_6(1DG1)
EFTU2_ECOLI
[Raw transfer]



GNP_A_2(2C78)
EFTU1_THET8
[Raw transfer]



GNP_A_2(4LC0)
EFTU1_THETH
[Raw transfer]



GNP_A_3(1EXM)
EFTU1_THETH
[Raw transfer]



GNP_A_3(2C77)
EFTU2_THET8
[Raw transfer]



GDP_G_5(1DG1)
EFTU2_ECOLI
[Raw transfer]



GNP_P_9(1B23)
EFTU_THEAQ
[Raw transfer]



GDP_A_6(1D8T)
EFTU1_ECOLI
[Raw transfer]



GNP_A_2(4LBV)
EFTU1_THETH
[Raw transfer]



GDP_A_3(1HA3)
EFTU1_THET8
[Raw transfer]



GNP_A_2(4LBW)
EFTU1_THETH
[Raw transfer]



GNP_A_2(4LBZ)
EFTU1_THETH
[Raw transfer]



GNP_A_2(4LBY)
EFTU1_THETH
[Raw transfer]



GDP_A_5(3U6K)
EFTU1_ECOLI
[Raw transfer]



GDP_A_3(3U2Q)
?
[Raw transfer]



GDP_A_4(4G5G)
EFTU1_ECOLI
[Raw transfer]



GNP_A_3(1EFT)
EFTU_THEAQ
[Raw transfer]



GDP_A_3(2FX3)
EFTU1_ECOLI
[Raw transfer]



GDP_B_7(1HA3)
EFTU1_THET8
[Raw transfer]



GDP_B_8(1TUI)
EFTU_THEAQ
[Raw transfer]



GDP_K_10(4IW3)
EFTU1_PSEPK
[Raw transfer]



GNP_B_6(2BVN)
EFTU2_ECOLI
[Raw transfer]



GNP_A_5(1OB2)
EFTU2_ECOLI
[Raw transfer]



GNP_A_3(2BVN)
EFTU2_ECOLI
[Raw transfer]



GDP_C_9(1TUI)
EFTU_THEAQ
[Raw transfer]



GNP_A_5(4PC6)
?
[Raw transfer]



GDP_B_7(3U6K)
?
[Raw transfer]



GNP_B_7(4PC6)
?
[Raw transfer]



GDP_A_7(1TUI)
EFTU_THEAQ
[Raw transfer]



GDP_A_3(1ETU)
EFTU1_ECOLI
[Raw transfer]



GDP_B_7(4IW3)
EFTU1_PSEPK
[Raw transfer]



GNP_A_3(4PC7)
EFTU1_ECOLI
[Raw transfer]



TAC_B_8(2HCJ)
EFTU1_ECOUT
[Raw transfer]
30 PsiBlast_CBE 95.7475%-100 - C3 -1D8T 8.9 EFTU1_ECOLI
22 PsiBlast_CBE 95.3175% -97 - C3 -1DG1 7.3 EFTU2_ECOLI
3 PsiBlast_PDB 95.2275% -94 - C3 -4G5G 8.5 EFTU1_ECOLI
8 PsiBlast_PDB 95.1675% -97 - C3 -1EFC 8.8 EFTU1_ECOLI
15 PsiBlast_PDB 95.1075% -96 - C3 -1D8T 8.6 EFTU1_ECOLI
1 PsiBlast_PDB 94.9875%-100 - C3 -3U6K 7.3 EFTU1_ECOLI
4 PsiBlast_PDB 94.8375% -97 - C3 -1DG1 8.3 EFTU2_ECOLI
33 PsiBlast_CBE 94.6971% -94 - C3 -1EXM 9.5 EFTU1_THETH
21 PsiBlast_CBE 94.6975% -94 - C3 -3U6K 5.8 ?
24 PsiBlast_CBE 94.3775%-107 - C3 -4PC3 - EFTU1_ECOLI -
28 PsiBlast_CBE 94.3275% -95 - C3 -1EFC 8.4 EFTU1_ECOLI
34 PsiBlast_CBE 94.0071% -96 - C3 -4H9G 9.7 EFTU1_THETH
35 PsiBlast_CBE 93.9271% -98 - C3 -2C78 9.5 EFTU1_THET8
112 HHSearch 93.8673% -97 - C3 -2C78 - EFTU1_THET8 -
2 PsiBlast_PDB 93.8175% -94 - C3 -3U2Q 7.1 ?
16 PsiBlast_PDB 93.6175% -94 - C3 -2FX3 7.3 EFTU1_ECOLI
19 PsiBlast_PDB 93.6071% -95 - C3 -1EFT 9.3 EFTU_THEAQ
26 PsiBlast_CBE 93.3375%-113 - C3 -4PC1 - ? -
25 PsiBlast_CBE 93.2575%-105 - C3 -4PC2 - ? -
46 PsiBlast_CBE 93.2171% -95 - C3 -4LC0 9.5 EFTU1_THETH
48 PsiBlast_CBE 93.1571% -95 - C3 -4LBY 9.4 EFTU1_THETH
47 PsiBlast_CBE 93.1471% -92 - C3 -4LBZ 9.5 EFTU1_THETH
49 PsiBlast_CBE 92.7871% -94 - C3 -4LBW 9.7 EFTU1_THETH
23 PsiBlast_CBE 92.7875%-105 - C3 -4PC6 6.9 ?
20 PsiBlast_PDB 92.7571% -96 - C3 -2C77 9.9 EFTU2_THET8
5 PsiBlast_PDB 92.7475%-107 - C3 -4PC6 6.0 ?
11 PsiBlast_PDB 92.7175% -98 - C3 -2BVN 8.6 EFTU2_ECOLI
7 PsiBlast_PDB 92.6575% -92 - C3 -1OB2 6.9 EFTU2_ECOLI
45 PsiBlast_CBE 92.5071% -95 - C3 -1B23 8.5 EFTU_THEAQ
27 PsiBlast_CBE 92.2275% -99 - C3 -2BVN 9.2 EFTU2_ECOLI
50 PsiBlast_CBE 92.1171% -94 - C3 -4LBV 9.6 EFTU1_THETH
55 PsiBlast_CBE 91.5171% -99 - C3 -4IW3 6.4 EFTU1_PSEPK
38 PsiBlast_CBE 91.2171%-100 - C3 -1TUI 6.6 EFTU_THEAQ
36 PsiBlast_CBE 90.9971%-100 - C3 -1TUI 6.1 EFTU_THEAQ
37 PsiBlast_CBE 90.8771% -98 - C3 -1TUI 6.7 EFTU_THEAQ
54 PsiBlast_CBE 90.8671%-104 - C3 -4IW3 7.6 EFTU1_PSEPK
32 PsiBlast_CBE 90.8071%-102 - C3 -1HA3 9.1 EFTU1_THET8
31 PsiBlast_CBE 89.3971%-106 - C3 -1HA3 8.2 EFTU1_THET8
6 PsiBlast_PDB 89.2875%-101 - C3 -4PC7 7.7 EFTU1_ECOLI
63 PsiBlast_CBE 86.9975%-109 - C3 -2HCJ 3.4 EFTU1_ECOUT
17 PsiBlast_PDB 61.7475%-117 - C3 -1ETU 4.5 EFTU1_ECOLI