@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0548: (2016-03-16 )
MIKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTETKVTFNDQLTQDQFWLNGEKVSGKELEKISKYMDIVRNRAGIDWYAEIESDNFVPTAAGLASSASAYAALAAACNQALDLQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYNDETSYAVPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHIDEDLAEAKAAIQDKDFKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHECREAGYPCYFTMDAGPNVKILVEKKNKQQIIDKLLTQFDNNQIIDSDIIATGIEIIE

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2P0_A_3(3QT6)
?
[Raw transfer]



FM0_B_5(3QT8)
?
[Raw transfer]



FM0_A_3(3QT8)
?
[Raw transfer]



2P0_A_3(4DPY)
?
[Raw transfer]



FM0_A_3(3QT7)
?
[Raw transfer]



2P0_B_4(3QT6)
?
[Raw transfer]



DP6_A_3(4DU7)
?
[Raw transfer]



DP6_B_4(4DU7)
?
[Raw transfer]



2P0_B_4(4DPY)
?
[Raw transfer]



2P0_B_7(4DU8)
?
[Raw transfer]



FM0_B_4(3QT7)
?
[Raw transfer]



2P0_A_3(4DU8)
?
[Raw transfer]



GOL_A_4(4DPX)
?
[Raw transfer]



GOL_A_5(4Z7C)
?
[Raw transfer]



FMT_A_5(4DPX)
?
[Raw transfer]



AGS_B_5(4DPT)
?
[Raw transfer]



AGS_B_6(4DPU)
?
[Raw transfer]



AGS_A_4(4DPU)
?
[Raw transfer]



FMT_B_9(4DPX)
?
[Raw transfer]



EDO_A_10(2GS8)
?
[Raw transfer]



EDO_A_6(2GS8)
?
[Raw transfer]



EDO_A_6(2GS8)
?
[Raw transfer]
2 PsiBlast_PDB 97.3799% -82 - C1 -2HK3 - ? -
1 PsiBlast_PDB 95.5799% -82 - C1 -2HK2 - ? -
6 PsiBlast_PDB 88.9872% -77 - C1 -4DPT - ? -
36 PsiBlast_CBE 87.8472% -76 - C1 -4DPW - ? -
27 PsiBlast_CBE 87.7772% -74 - C1 -4DPU 6.9 ?
31 PsiBlast_CBE 87.3272% -73 - C1 -4DPW - ? -
10 PsiBlast_PDB 87.2672% -75 - C1 -4DPX 3.2 ?
11 PsiBlast_PDB 87.2072% -75 - C1 -4DPY 7.1 ?
3 PsiBlast_PDB 86.9872% -77 - C1 -3QT5 - ? -
35 PsiBlast_CBE 86.9272% -75 - C1 -4DPW - ? -
26 PsiBlast_CBE 86.7272% -76 - C1 -4DPX 2.8 ?
30 PsiBlast_CBE 86.6572% -75 - C1 -4DPW - ? -
9 PsiBlast_PDB 86.5972% -75 - C1 -4DPU 4.7 ?
13 PsiBlast_PDB 86.5772% -78 - C1 -4DU8 7.1 ?
4 PsiBlast_PDB 86.5372% -76 - C1 -3QT6 7.1 ?
8 PsiBlast_PDB 86.5172% -77 - C1 -3QT8 7.4 ?
25 PsiBlast_CBE 86.2472% -77 - C1 -4DPY 7.4 ?
32 PsiBlast_CBE 86.1472% -73 - C1 -4DPW - ? -
7 PsiBlast_PDB 86.0772% -76 - C1 -4DU7 7.2 ?
22 PsiBlast_CBE 85.8972% -72 - C1 -4DPT 5.9 ?
21 PsiBlast_CBE 85.5672% -76 - C1 -4DU7 6.7 ?
29 PsiBlast_CBE 85.3772% -76 - C1 -4DU8 6.9 ?
23 PsiBlast_CBE 84.9872% -76 - C1 -3QT7 7.6 ?
24 PsiBlast_CBE 84.7472% -74 - C1 -3QT6 6.8 ?
5 PsiBlast_PDB 84.5872% -77 - C1 -3QT7 7.7 ?
28 PsiBlast_CBE 83.4172% -74 - C1 -3QT8 7.4 ?
15 PsiBlast_PDB 70.1836% -62 - C1 -4Z7C 1.4 ?
14 PsiBlast_PDB 67.1640% -68 - C1 -2GS8 3.0 ?
60 HHSearch 64.1939% -56 * C1 *2GS8 2.3 ?