@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0598: (2016-03-17 )
MKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGKVHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGACLVAGLALIVHMIINRLFRKRK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_H_8(1TVF)
?
[Raw transfer]




UNL_H_8(1TVF)
?
[Raw transfer]




CEW_B_4(3HUM)
?
[Raw transfer]




UNL_I_9(1TVF)
?
[Raw transfer]




CEW_A_3(3HUM)
?
[Raw transfer]




ZZ7_A_3(3HUN)
?
[Raw transfer]




ZZ7_A_3(3HUN)
?
[Raw transfer]




ZZ7_B_4(3HUN)
?
[Raw transfer]




SIN_A_3(4K91)
?
[Raw transfer]




3 PsiBlast_PDB 99.63100% -68 - C3 -1TVF 2.6 ?
38 HHSearch 99.23100% -68 - C3 -1TVF 2.6 ?
37 HHSearch 98.81100% -66 - C3 -3HUN 2.1 ?
2 PsiBlast_PDB 98.6099% -66 - C3 -3HUN 2.1 ?
21 PsiBlast_CBE 98.0899% -65 - C3 -3HUN 2.7 ?
23 PsiBlast_CBE 97.79100% -67 - C3 -1TVF 2.6 ?
1 PsiBlast_PDB 97.2299% -64 - C3 -3HUM 3.1 ?
22 PsiBlast_CBE 96.7899% -63 - C3 -3HUM 2.7 ?
42 HHSearch 60.0930% -35 - C3 -1XP4 - ? -
40 HHSearch 59.2326% -39 - C3 -3ITA - DACC_ECOLI -
39 HHSearch 59.1327% -46 * C3 *3MZF - DACA_ECOLI -
41 HHSearch 58.9428% -43 - C3 -3A3J - DACA_HAEIN -
14 PsiBlast_PDB 58.7525% -43 - C3 -3MZD - DACA_ECOLI -
58 Fugue 58.4724% -46 - C3 -1HD8 - DACA_ECOLI -
18 PsiBlast_PDB 57.7125% -49 - C3 -1NJ4 - DACA_ECOLI -
9 PsiBlast_PDB 57.4725% -41 - C3 -1NZO - DACA_ECOLI -
17 PsiBlast_PDB 57.3125% -47 - C3 -1HD8 - DACA_ECOLI -
5 PsiBlast_PDB 57.1327% -43 - C3 -3A3J - DACA_HAEIN -
43 HHSearch 56.7427% -41 - C3 -3MFD - DACB_BACSU -
16 PsiBlast_PDB 56.4325% -42 - C3 -3MZF - DACA_ECOLI -