@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0599: (2016-03-17 )
MKRENPLFFLFKKLSWPVGLIVAAITISSLGSLSGLLVPLFTGRIVDKFSVSHINWNLIALFGGIFVINALLSGLGLYLLSKIGEKIIYAIRSVLWEHIIQLKMPFFDKNESGQLMSRLTDDTKVINEFISQKLPNLLPSIVTLVGSLIMLFILDWKMTLLTFITIPIFVLIMIPLGRIMQKISTSTQSEIANFSGLLGRVLTEMRLVKISNTERLELDNAHKNLNEIYKLGLKQAKIAAVVQPISGIVMLLTIAIILGFGALEIATGAITAGTLIAMIFYVIQLSMPLINLSTLVTDYKKAVGASSRIYEIMQEPIEPTEALEDSENVLIDDGVLSFEHVDFKYDVKKILDDVSFQIPQGQVSAFVGPSGSGKSTIFNLIERMYEIESGDIKYGLESVYDIPLSKWRRKIGYVMQSNSMMSGTIRDNILYGINRHVSDEELINYAKLANCHDFIMQFDEGYDTLVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESELKIQEALETLMEGRTTIVIAHRLSTIKKAGQIIFLDKGQVTGKGTHSELMASHAKYKNFVVSQKLTD

Atome Classification :

(65 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_C_9(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_A_3(2IXE)
TAP1_RAT
[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_3(2IXE)
TAP1_RAT
[Raw transfer]




ATP_A_2(4K8O)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_6(2IXE)

[Raw transfer]




ADP_A_2(5DGX)
?
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_A_2(2IXG)

[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_D_5(3VX4)
?
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




ATP_D_15(2IXF)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ADP_A_3(1JJ7)

[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




ATP_C_9(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_A_7(1MV5)

[Raw transfer]




10 PsiBlast_PDB 87.7233%-101 - C2 -4Q4A - Y288_THEMA -
5 PsiBlast_PDB 87.1133%-102 - C2 -4AYX 5.9 ABCBA_HUMAN
115 HHSearch 87.0332%-100 - C2 -3WMG - ? -
11 PsiBlast_PDB 86.9633% -99 - C2 -4Q4H - Y288_THEMA -
9 PsiBlast_PDB 86.7533%-104 - C2 -3QF4 - Y288_THEMA -
114 HHSearch 86.5332% -98 - C2 -3ZDQ - ABCBA_HUMAN -
6 PsiBlast_PDB 86.2633%-100 - C2 -3ZDQ - ABCBA_HUMAN -
32 PsiBlast_CBE 86.1433%-101 - C2 -4M1M - MDR1A_MOUSE -
17 PsiBlast_PDB 85.7632%-102 - C2 -3WMF - ? -
8 PsiBlast_PDB 85.1033%-100 - C2 -4Q4J - Y288_THEMA -
7 PsiBlast_PDB 84.8933%-102 - C2 -4AYW 5.8 ABCBA_HUMAN
31 PsiBlast_CBE 84.8733% -98 - C2 -4M1M - MDR1A_MOUSE -
21 PsiBlast_CBE 84.7636% -93 - C2 -2ONJ 6.0 Y1866_STAAM
23 PsiBlast_CBE 84.6333% -99 - C2 -4M2T - MDR1A_MOUSE -
25 PsiBlast_CBE 84.5333% -99 - C2 -4M2S - MDR1A_MOUSE -
24 PsiBlast_CBE 84.0733%-101 - C2 -4M2T - MDR1A_MOUSE -
2 PsiBlast_PDB 83.9936% -92 - C2 -2ONJ 6.1 Y1866_STAAM
26 PsiBlast_CBE 83.9733%-102 - C2 -4M2S - MDR1A_MOUSE -
19 PsiBlast_PDB 83.8932%-103 - C2 -3WME - ? -
18 PsiBlast_PDB 83.8532%-101 - C2 -3WMG - ? -
4 PsiBlast_PDB 83.6433% -99 - C2 -4AYT 6.1 ABCBA_HUMAN
22 PsiBlast_CBE 83.3836% -92 - C2 -2HYD 4.5 Y1866_STAAM
1 PsiBlast_PDB 83.3836% -90 - C2 -2HYD 4.5 Y1866_STAAM
37 PsiBlast_CBE 74.8332% -85 - C2 -4S0F 3.7 ?
38 PsiBlast_CBE 74.7132% -84 - C2 -4S0F 5.0 ?
40 PsiBlast_CBE 66.8451% -88 - C2 -1MV5 5.6 LMRA_LACLA
41 PsiBlast_CBE 65.7351% -82 - C2 -1MV5 4.0 LMRA_LACLA
42 PsiBlast_CBE 64.4051% -85 - C2 -1MV5 4.7 LMRA_LACLA
121 HHSearch 63.6152% -82 - C2 -1MV5 4.7 LMRA_LACLA
50 PsiBlast_CBE 63.4745% -84 - C2 -3NH9 6.3
48 PsiBlast_CBE 62.5845% -85 - C2 -3NHB 6.6
124 HHSearch 62.4544% -90 - C2 -2FF7 6.5
49 PsiBlast_CBE 62.0745% -80 - C2 -3NHA 6.7
78 PsiBlast_CBE 61.0935% -86 - C2 -4K8O 6.3
76 PsiBlast_CBE 60.6435% -87 - C2 -2IXE 6.7
39 PsiBlast_CBE 60.6051% -88 - C2 -1MV5 2.8
72 PsiBlast_CBE 60.1336% -85 - C2 -2IXF 7.6
73 PsiBlast_CBE 59.9636% -83 - C2 -2IXF 7.6 TAP1_RAT
77 PsiBlast_CBE 59.8635% -82 - C2 -2IXE 7.4 TAP1_RAT
56 PsiBlast_CBE 59.7446% -84 - C2 -2FFB 6.3
79 PsiBlast_CBE 59.3735% -84 - C2 -2IXG 6.9
74 PsiBlast_CBE 59.3736% -85 - C2 -2IXF 7.5 TAP1_RAT
44 PsiBlast_CBE 59.3047% -87 - C2 -2FF7 6.5
75 PsiBlast_CBE 59.1636% -85 - C2 -2IXF 7.2 TAP1_RAT
119 HHSearch 59.0835% -77 - C2 -2IXE 7.6 TAP1_RAT
65 PsiBlast_CBE 58.9046% -87 - C2 -1XEF 7.2 HLYBP_ECOLX
67 PsiBlast_CBE 58.6042% -83 - C2 -5DGX 6.7 ?
64 PsiBlast_CBE 58.4446% -90 - C2 -1XEF 7.2 HLYBP_ECOLX
47 PsiBlast_CBE 58.3247% -89 - C2 -2PMK 7.0
61 PsiBlast_CBE 57.9946% -81 - C2 -2FGJ 7.0 HLYBP_ECOLX
62 PsiBlast_CBE 57.9546% -87 - C2 -2FFA 6.5
80 PsiBlast_CBE 57.9232% -74 - C2 -1JJ7 6.0
59 PsiBlast_CBE 57.8646% -84 - C2 -2FGJ 7.0 HLYBP_ECOLX
66 PsiBlast_CBE 57.6946% -88 - C2 -1XEF 6.7 HLYBP_ECOLX
63 PsiBlast_CBE 57.3946% -84 - C2 -1XEF 7.0
54 PsiBlast_CBE 57.0546% -82 - C2 -2FGK 7.2 HLYBP_ECOLX
53 PsiBlast_CBE 56.9646% -78 - C2 -2FGK 6.8 HLYBP_ECOLX
58 PsiBlast_CBE 56.9446% -89 - C2 -2FGJ 6.9
52 PsiBlast_CBE 56.7046% -84 - C2 -2FGK 7.2
57 PsiBlast_CBE 56.3146% -89 - C2 -3B5J 6.8
60 PsiBlast_CBE 56.0846% -80 - C2 -2FGJ 7.4 HLYBP_ECOLX
55 PsiBlast_CBE 56.0046% -80 - C2 -2FGK 7.5 HLYBP_ECOLX
81 PsiBlast_CBE 54.5834% -74 - C2 -3VX4 6.5 ?
118 HHSearch 51.6834% -72 - C2 -3VX4 6.9 ?
82 PsiBlast_CBE 51.6234% -72 - C2 -3VX4 6.9 ?