@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0616: (2016-03-17 )
MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGSGKTTLLNVLSSIDYISQGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTVKENIMLPLTVQKLDKEHMLNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFITLPSIIFADEPTGALDSKSTQDLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKDGQIFTELYQGDDDKHTFFKEIIRVQSVLGGVNYDL

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_A_2(5DGX)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




3 PsiBlast_PDB 86.4338% -96 - C1 -1F3O - Y796_METJA -
80 PsiBlast_CBE 86.1033% -99 - C1 -3FVQ 7.5 FBPC_NEIG1
21 PsiBlast_CBE 85.6439% -97 - C1 -1L2T - Y796_METJA -
1 PsiBlast_PDB 84.8939% -96 - C1 -1L2T - Y796_METJA -
81 PsiBlast_CBE 84.6333%-101 - C1 -3FVQ 6.9 FBPC_NEIG1
117 Fugue 84.4531% -90 - C1 -1OXS - ? -
108 HHSearch 83.5337% -93 - C1 -2PCJ - LOLD_AQUAE -
22 PsiBlast_CBE 82.6638%-100 - C1 -3TIF - Y796_METJA -
39 PsiBlast_CBE 81.9332% -98 - C1 -2AWN - MALK_ECOLI -
2 PsiBlast_PDB 81.8938% -94 - C1 -3TIF - Y796_METJA -
30 PsiBlast_CBE 81.4432%-108 - C1 -3RLF - MALK_ECOLI -
111 HHSearch 81.4137% -90 - C1 -3TIF 5.9 Y796_METJA
49 PsiBlast_CBE 81.3334% -98 - C1 -1OXU - ? -
28 PsiBlast_CBE 81.2332%-104 - C1 -4KI0 - ? -
35 PsiBlast_CBE 81.0632%-103 - C1 -3PUW - MALK_ECOLI -
51 PsiBlast_CBE 81.0534% -98 - C1 -1OXU - ? -
34 PsiBlast_CBE 80.9432%-107 - C1 -3PUX - MALK_ECOLI -
90 PsiBlast_CBE 80.7232% -89 - C1 -1B0U 6.1 HISP_SALTY
50 PsiBlast_CBE 80.6934%-100 - C1 -1OXU - ? -
19 PsiBlast_PDB 80.4232%-105 - C1 -3PUV - MALK_ECOLI -
79 PsiBlast_CBE 75.8935%-106 - C1 -4MKI 2.0 ECFA2_CALS4
78 PsiBlast_CBE 75.6235%-106 - C1 -4MKI 2.2 ECFA2_CALS4
74 PsiBlast_CBE 66.9834%-105 - C1 -4YMU 4.9 ?
114 HHSearch 66.8933% -93 * C1 *2OLJ 6.2 ?
73 PsiBlast_CBE 66.5534%-107 - C1 -4YMV 4.4 ?
75 PsiBlast_CBE 66.0234%-107 - C1 -4YMU 4.4 ?
72 PsiBlast_CBE 65.5034%-103 - C1 -4YMV 4.1 ?
89 PsiBlast_CBE 56.6233% -90 - C1 -2HYD 3.5 Y1866_STAAM
86 PsiBlast_CBE 56.1133% -91 - C1 -2ONJ 4.3 Y1866_STAAM
88 PsiBlast_CBE 55.8633% -91 - C1 -2HYD 3.4 Y1866_STAAM
87 PsiBlast_CBE 55.2333% -89 - C1 -2ONJ 5.8 Y1866_STAAM
93 PsiBlast_CBE 52.9731% -96 - C1 -5DGX 6.6 ?