@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0646: (2016-03-17 )
MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMSSASDLKAQFYRGTLQRFYQSLHAEKLTPYVMSYDDIISFCKENNISEVVIAGDIMSYHLEEYDILHQRSLFNEARIAVTLIRGNHYFKASKTMNQQGEPYKVFTSFYRKWRPYLRHRDVYHYDLKSFEDFVIASPDDLVFDDIAFGSSQVIEQNKWQHFLDQDIQNYESGRDYLPEVLTSQLSVALAYGLLDIIEIFNDLLARYDEDEANHEAFIRELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEANFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQFLTKDLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERFDAKALYIKTYLPIFNQIDAKYLHDTQRNESNLFEQGIELGSHYPRQMVDHQEKRTQVLATFKALD

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(1DNP)
PHR_ECOLI
[Raw transfer]



FAD_A_3(1DNP)
PHR_ECOLI
[Raw transfer]



FAD_B_5(1DNP)
PHR_ECOLI
[Raw transfer]



FAD_C_3(1IQR)
PHR_THET8
[Raw transfer]



FAD_F_6(1NP7)
CRYD_SYNY3
[Raw transfer]



FAD_B_2(1QNF)
PHR_SYNP6
[Raw transfer]



FAD_A_3(4U63)
PHRA_AGRFC
[Raw transfer]



FAD_C_3(1OWN)
PHR_SYNP6
[Raw transfer]



FAD_A_4(2J08)
PHR_THET8
[Raw transfer]



FAD_C_3(1OWP)
PHR_SYNP6
[Raw transfer]



FAD_C_3(1OWM)
PHR_SYNP6
[Raw transfer]



FAD_D_4(1OWL)
PHR_SYNP6
[Raw transfer]



FAD_C_3(1OWO)
PHR_SYNP6
[Raw transfer]



TDR_C_3(1IQU)
PHR_THET8
[Raw transfer]



NACID_K_3(1TEZ)
PHR_SYNP6
[Raw transfer]
-
NACID_I_1(1TEZ)
PHR_SYNP6
[Raw transfer]
-
40 HHSearch 98.2529% -79 - C3 -1OWL - PHR_SYNP6 -
37 HHSearch 96.9430% -78 * C3 *1DNP 12.0 PHR_ECOLI
47 Fugue 96.3629% -87 - C3 -1DNP - PHR_ECOLI -
39 HHSearch 89.9926% -83 - C3 -2E0I - ? -
21 PsiBlast_CBE 89.1933% -78 - C3 -1DNP 11.8 PHR_ECOLI
19 PsiBlast_PDB 88.2825% -79 - C3 -4CT0 - CRY1_MOUSE -
1 PsiBlast_PDB 88.2333% -78 - C3 -1DNP 12.0 PHR_ECOLI
20 PsiBlast_PDB 87.2825% -79 - C3 -4K0R - CRY1_MOUSE -
17 PsiBlast_PDB 87.2824% -78 - C3 -1U3C - CRY1_ARATH -
35 HHSearch 87.1422% -76 - C3 -1U3D - CRY1_ARATH -
18 PsiBlast_PDB 87.0324% -79 - C3 -1U3D - CRY1_ARATH -
42 HHSearch 85.6925% -82 - C3 -2J07 - PHR_THET8 -
38 HHSearch 85.6821% -76 - C3 -3FY4 - UVR3_ARATH -
2 PsiBlast_PDB 84.6533% -72 - C3 -4U63 10.3 PHRA_AGRFC
43 HHSearch 83.2820% -77 - C3 -2J4D - CRYD_ARATH -
36 HHSearch 82.6322% -75 - C3 -1NP7 - CRYD_SYNY3 -
41 HHSearch 82.5020% -73 - C3 -2WQ7 - ? -
24 PsiBlast_CBE 79.3436% -57 - C3 -1TEZ 6.0 PHR_SYNP6
23 PsiBlast_CBE 79.3136% -56 - C3 -1TEZ - PHR_SYNP6 -
5 PsiBlast_PDB 79.2636% -58 - C3 -1OWN 12.3 PHR_SYNP6
9 PsiBlast_PDB 79.2336% -58 - C3 -1TEZ 6.6 PHR_SYNP6
4 PsiBlast_PDB 79.1936% -60 - C3 -1OWM 12.2 PHR_SYNP6
3 PsiBlast_PDB 79.1136% -59 - C3 -1OWL 11.9 PHR_SYNP6
6 PsiBlast_PDB 78.9136% -58 - C3 -1OWO 12.0 PHR_SYNP6
7 PsiBlast_PDB 78.7836% -59 - C3 -1OWP 12.4 PHR_SYNP6
8 PsiBlast_PDB 78.6736% -55 - C3 -1QNF 11.8 PHR_SYNP6
11 PsiBlast_PDB 66.7633% -69 - C3 -1IQR 10.7 PHR_THET8
12 PsiBlast_PDB 66.7533% -68 - C3 -1IQU 2.9 PHR_THET8
14 PsiBlast_PDB 66.0733% -68 - C3 -2J08 11.4 PHR_THET8
16 PsiBlast_PDB 62.9833% -64 - C3 -1NP7 11.9 CRYD_SYNY3